Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0989 ATGGCTTCAAATGAACGTGATATGTTCTCAGCAGAGATTGTGAACCGTGGGATCGAATCATCGGGACCGAATGCCGGTTCATTGACGTTCTCCGTTCGTGTTCGAAGACGGTTACCGGATTTTCTTCAATCTGTTAACCTTAAGTATGTGAAATTGGGTTACCATTATCTGATAAACCATGGTGTTTATTTGTTCACAGTACCAATTCTACTTTTGGTGTTTAGTGCTGAGGTTGGTAGTCTTAGCAAAGAAGATCTTTGGAAGAAGATTTGGGAAGAGGCAAGTTATGATCTTGCTTCTGTTCTCTCTTCACTTGCTGTTTTTGTTATCACTTTCACTCTTTATTTCATGTCAAGGCCACGTCCTATTTATCTCATTGATTTTGCATGCTATCAACCCGATGATGAACTCAAGGTATCAAGGGACCAATTGATAGAGTTAGCAAGAAAATCAGGAAAATTTGATGAAGGAAGTTTAGAATTCCAAAAGAGGATTGTAATGTCATCAGGAATAGGTGATGAAACATACATTCCAAAATCACTGATAGCATCAAGTGAAAACACAGCAACAATGAAAGAAGGTAGAGCTGAAGCATCAATGGTTATGTTTGGAGCACTTGATGAACTCTTTGAAAAAACAGGAATTAGACCAAAAGATGTTGGTGTTCTTGTTGTAAATTGTAGCATATTCAATCCAACACCATCATTGTCAGCTATGATTATAAATCATTATAAGATGAGAGGAAATATTTTGAGTTATAATCTTGGTGGTATGGGTTGTAGTGCTGGAATTATTGCTGTTGATTTGGCTAGAGATATACTTCAATCTAATCCTGGTAATTTTGCTGTTGTTGTGAGTACTGAAATGGTTGGATTTAATTGGTATCAAGGAAAAGAAAGATCAATGCTTATTCCAAATTGTTTCTTTCGTATGGGTTGTTCTGCTCTTTTGCTATCTAACCGTCGTCGCGATTATAGCCGCGCGAAATATCGTCTTGAACATATTGTTCGTACACATAAAGGTGCCGATGATCGCAGTTTCAGGTGTGTGTACCAAGAGGAAGACGATCAGAAATTCAAGGGACTAAAGATAAGCAAAGACTTGATTGAAATTGGTGGTGAAGCTCTCAAAACTAACATCACAACACTAGGACCATTGGTCCTACCCTTTTCAGAACAGCTTTTTTTCTTTGCTACATTAGTGCGGAGGAAATTATTTGGTGGTGGAAAATCTGATAAAAATTCACCATCATCAAACAAGCCATACATTCCTAACTACAAACTAGCTTTTGAGCATTTCTGTGTGCATGCTGCTAGCAAAGCAATTCTTGATGAGCTTCAAAAGAATCTTGAATTGAGTGACAAGAACATGGAAGCTTCTAGAGTGACGCTGCACCGATTCGGTAACACTTCTAGCAGCAGCATTTGGTATGAACTTGCTTATATGGAGGCAAAGGAGAAAGTTAACAGAGGAGACCGTGTTTGGCAACTTGCTTTTGGTTCTGGTTTTAAGTGTAACAGTGCTGTTTGGCGTTCGATGCGTTGTGTCGCAAAACCTTCTTCTAGGAACCCTTGGCTTGACTGCATCAATGAATATCCTGATTCTCTCAATTAA 1614 0.386 MASNERDMFSAEIVNRGIESSGPNAGSLTFSVRVRRRLPDFLQSVNLKYVKLGYHYLINHGVYLFTVPILLLVFSAEVGSLSKEDLWKKIWEEASYDLASVLSSLAVFVITFTLYFMSRPRPIYLIDFACYQPDDELKVSRDQLIELARKSGKFDEGSLEFQKRIVMSSGIGDETYIPKSLIASSENTATMKEGRAEASMVMFGALDELFEKTGIRPKDVGVLVVNCSIFNPTPSLSAMIINHYKMRGNILSYNLGGMGCSAGIIAVDLARDILQSNPGNFAVVVSTEMVGFNWYQGKERSMLIPNCFFRMGCSALLLSNRRRDYSRAKYRLEHIVRTHKGADDRSFRCVYQEEDDQKFKGLKISKDLIEIGGEALKTNITTLGPLVLPFSEQLFFFATLVRRKLFGGGKSDKNSPSSNKPYIPNYKLAFEHFCVHAASKAILDELQKNLELSDKNMEASRVTLHRFGNTSSSSIWYELAYMEAKEKVNRGDRVWQLAFGSGFKCNSAVWRSMRCVAKPSSRNPWLDCINEYPDSLN* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0989 537 Coils Coil 443 463 - -
Mal2g0989 537 PANTHER 3-KETOACYL-COA SYNTHASE 5 534 IPR012392 GO:0006633|GO:0016020|GO:0016747
Mal2g0989 537 CDD CHS_like 106 510 - -
Mal2g0989 537 PIRSF Very_long_ch_3-ktacl-CoA_syn 40 537 IPR012392 GO:0006633|GO:0016020|GO:0016747
Mal2g0989 537 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 431 511 IPR013747 -
Mal2g0989 537 PANTHER 3-KETOACYL-COA SYNTHASE 10 5 534 - -
Mal2g0989 537 Pfam FAE1/Type III polyketide synthase-like protein 115 405 IPR013601 GO:0006633|GO:0016020|GO:0016747
Mal2g0989 537 SUPERFAMILY Thiolase-like 333 512 IPR016039 GO:0016746
Mal2g0989 537 Gene3D - 127 513 IPR016039 GO:0016746
Mal2g0989 537 SUPERFAMILY Thiolase-like 109 327 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0989 Mal-Chr2 11652379 11655922 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0989 3 536 Miscellaneous Gene Families AT2G26250 74.410 0.0 865
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0989 K15397 - gmx:100778487 951.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0989 2 11652379 11655922 Mal2g0989 2 11652379 11655922 ECH