Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0980 ATGAATGACCCAGTGAATGCAGCAGCACAAGTGGGAGATATAGACTTGCTATACAATCTGATTCAAATGGATCCATACATCTTAGAATGCAATAATTTAATACCATTTGTTGATACTCCTTTGCATATTGCTGCAGCTTCTGGGCATGCAAGTTTTGCCACTGAGATTATGAGACTAAAACCTTCATTTGCTTGGAAGCTAAACCAGTATGGACTCAGTCCCATACACCTTGCTTTACAAAACAAACATTACAGAATGGTGCGTCGCTTTGTAGACATTAATAAAGACCTTGTCCGAATCAAAGGGAGAGAGGGTCTAACTCCTTTGCATATTGCTACTCAAACTGGAAACTCTGATCTTGTAGTTAAATTCTTGTCAGTTTGTCCAGGTTGTATTGAAGATGTTACAGTTCGAAGCGAGACTGCTCTGCATATTGCTGTGAAATATAAACAGTTTCATGTCCTTGAGATCTTGCTTGGTTGGCTTCAAAGGACATGCCATAGACGTTCTCACCACAAGGAAAAACGGGTTCTGAATTGGGAGGATGAAGCAGGCAACACCATCCTGCACATTGCAGTTCTCAATAGCTTCCCACAGGAAGTTGGATTGTTGATTGATAGCAACATAGACATAAATGCCAAGAATTTAGAAGAACAAACAGCATTGGACATAGTGGAGCAGATTCAGAACCAAGTTTATAGTGTAGAAATCAGGAACATGTTGATTAAAGCTGGAGCTTTACGTGGTTTTTCGCTTGCTCCTACTCCACTTCAAGAAGAGCTACGATCAAAAATCACATTCAACGAGAGAGTAGCGATTTGTGTTACTCGTCTAAGAAGGAGAATTTCAAATGACACAAGAAACGCTTTGTTAGTAATTGCTATTCTTTTCGCGACAAGCGCATACGAAGCAACACTTAACCCTCCAGCTGGTGGAGGGAAATTATTGGTGATGAAAATGCAAACGTACTTCTCATGGTTTTGGTCGTTTAATACATTTTCATTCTATGTTTCAATTTTGATGATGTGTTTATTAATGCCAAGAGGACGTATAAGTATTATTGTGACTTGTCCACTTGCTCTATTCTGTGGTTGTTACGTGTTTTCCATGCTAATTATAGCACCAAGCTATACATTTGGAATTGTCACTGTGGCTATTCCGTGTATACTTGGAGCATTGTATTGTTGGGGAGCTATAATATACATTACATTAGGCCAAAAGCTTCGAATGTATGGTTGTAAACGGGAAGATGTATCCAAATTTTCAGCAGGAAACATATGGTAA 1284 0.391 MNDPVNAAAQVGDIDLLYNLIQMDPYILECNNLIPFVDTPLHIAAASGHASFATEIMRLKPSFAWKLNQYGLSPIHLALQNKHYRMVRRFVDINKDLVRIKGREGLTPLHIATQTGNSDLVVKFLSVCPGCIEDVTVRSETALHIAVKYKQFHVLEILLGWLQRTCHRRSHHKEKRVLNWEDEAGNTILHIAVLNSFPQEVGLLIDSNIDINAKNLEEQTALDIVEQIQNQVYSVEIRNMLIKAGALRGFSLAPTPLQEELRSKITFNERVAICVTRLRRRISNDTRNALLVIAILFATSAYEATLNPPAGGGKLLVMKMQTYFSWFWSFNTFSFYVSILMMCLLMPRGRISIIVTCPLALFCGCYVFSMLIIAPSYTFGIVTVAIPCILGALYCWGAIIYITLGQKLRMYGCKREDVSKFSAGNIW* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0980 427 PANTHER HOMEOBOX PROTEIN WARIAI 313 391 - -
Mal2g0980 427 Pfam Ankyrin repeat 185 215 IPR002110 GO:0005515
Mal2g0980 427 SMART ANK_2a 36 65 IPR002110 GO:0005515
Mal2g0980 427 SMART ANK_2a 70 99 IPR002110 GO:0005515
Mal2g0980 427 SMART ANK_2a 184 213 IPR002110 GO:0005515
Mal2g0980 427 SMART ANK_2a 138 168 IPR002110 GO:0005515
Mal2g0980 427 SMART ANK_2a 104 134 IPR002110 GO:0005515
Mal2g0980 427 Pfam Ankyrin repeats (3 copies) 99 159 IPR002110 GO:0005515
Mal2g0980 427 ProSiteProfiles Ankyrin repeat region circular profile. 184 215 - -
Mal2g0980 427 ProSiteProfiles Ankyrin repeat profile. 184 216 IPR002110 GO:0005515
Mal2g0980 427 Gene3D - 1 254 IPR036770 -
Mal2g0980 427 Pfam Domain of unknown function 284 383 IPR026961 -
Mal2g0980 427 ProSiteProfiles Ankyrin repeat profile. 104 125 IPR002110 GO:0005515
Mal2g0980 427 PANTHER HOMEOBOX PROTEIN WARIAI 10 311 - -
Mal2g0980 427 ProSiteProfiles Ankyrin repeat region circular profile. 104 125 - -
Mal2g0980 427 SUPERFAMILY Ankyrin repeat 4 224 IPR036770 -
Mal2g0980 427 PANTHER ANKYRIN REPEAT PROTEIN 10 311 - -
Mal2g0980 427 PANTHER ANKYRIN REPEAT PROTEIN 313 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0980 Mal-Chr2 11555024 11556583 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0980 8 311 Miscellaneous Gene Families AT4G10720 46.078 6.63e-86 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0980 - - gmx:100790227 594.349