Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0907 ATGGGATTCATCAGCGGCATGATCATTGGTATTGTGATTGGTATCATATTGGTCGTCGCTTTCGCTCGTCAAGAAAGCACTCGATCCAAGCATCGAACCGATTTGGCGAAGACGATAGCAAAGTTTGCGAGGATGACCGTAGAGGATTCGAGAAAACTTCTGCCTCCAAACTTCTATCCGTCATGGGTGTTAAACTGGCTTAATAGTCAATTAGAAAAGATTTGGCCGTTTGTCAATGAGGCAGCGACAGAATTGATAAAAAGTAACGTCGAACCCATTCTTGAACAATATAGGCCAGTGATTTTATCTTCTCTCACATTTTCAACGTTGACACTCGGTAATGTAGCTCCACAAATTACAGGAATTTCAATTATTGAAGAAGATAGTGGACCTAATGGAGTGACAATGGAGTTTGACATGCAGTGGGATGGTAACCCCAATATTGTTCTTGACATTAAAACCAAAGTTGGTGTTGTACTACCTGTGCAGGTAAAAAATATTGGATTCACTGGGGTTTTCAGGTTGATCTTCAAACCACTTGTAAATGAATTCCCTGGTTTTGGAGCCGTTTGTTTTTCCCTGAGAAAAAAGAAAGCTCTGGATTTTACTCTTAAGGTTGTTGGTGGTGATATTTCAACCTTACCGGGGATATCTGATGCTATAGAGGAAACAATTCGAGATGCCATTGAAGACTCTATAACTTGGCCAGTACGGAAAATTATACCAATTATACCAGGAGATTATAGTAACCTAGAATTAAAACCCGTTGGAACACTAGATGTAAAACTAGTGCAAGCAAAGAACTTAGCAAATAAAGACGTGATTGGGAAATCTGATCCTTTTGCTCACGTATTTGTACGCCCAATTCGTGACAAAATCAAAACCAGTAAAACAATTAACAACCAGTTGAACCCAATATGGAATGAACATTTTGAATTCATTATTGAAGATGAATCAACACAACACTTGACTATAAGAATCTTTGATGATGAAGGGATTCAGGCAGCTGAGCTTATTGGTTGTGCCCAAGTTTCCTTAAAGGAACTTGAACCTGGTAAAGTTAAGGATGTATGGTTGAAATTGGTTAAAGATTTAGAGATCCAAAGAGATAACAAATATAGGGGTGAGGTGCACTTGGAGCTTTTGTATTGTCCATATGGAGTTGAGAACACTTTTAAGAGCCCTTTTGTCACCGATTACTCGTTAACAACGTTCGAGAAAACCCTCAAGAATGGAGCTAGTGACGGAGATGAAGATGATATTTCAATATCATCATCATCATCTCGGAGGAAAAGCAATGTGATTGTAAGAGGAGTTCTATCAGTCACTGTAATTTCAGCTGAAGACTTACCGATAGTAGATTTTATGGGCAAGGCTGACCCATTTGTTGTTCTTGCATTGAAAAAATCAGAAAAGAAACAAAAGACCCGAGTTGTAAATGAAACTCTAAATCCAGTATGGAATCAAACATTTGACTTTGTTGTGGAGGATGGATTACACGACATGTTAATTGTTGAACTTTGGGATCACGATACCTTTGGCAAGGAAAAAATGGGAAAAGTGATCATGACACTAACCAAGGTCATCTTAGAAGGGGAATATGACGAAACATTTATATTGGATGATGCTAAATCCGGAAAGATTAATTTGCATCTAAAGTGGACTGCACAACACAAGTTTCGGGAACCTTAA 1692 0.3848 MGFISGMIIGIVIGIILVVAFARQESTRSKHRTDLAKTIAKFARMTVEDSRKLLPPNFYPSWVLNWLNSQLEKIWPFVNEAATELIKSNVEPILEQYRPVILSSLTFSTLTLGNVAPQITGISIIEEDSGPNGVTMEFDMQWDGNPNIVLDIKTKVGVVLPVQVKNIGFTGVFRLIFKPLVNEFPGFGAVCFSLRKKKALDFTLKVVGGDISTLPGISDAIEETIRDAIEDSITWPVRKIIPIIPGDYSNLELKPVGTLDVKLVQAKNLANKDVIGKSDPFAHVFVRPIRDKIKTSKTINNQLNPIWNEHFEFIIEDESTQHLTIRIFDDEGIQAAELIGCAQVSLKELEPGKVKDVWLKLVKDLEIQRDNKYRGEVHLELLYCPYGVENTFKSPFVTDYSLTTFEKTLKNGASDGDEDDISISSSSSRRKSNVIVRGVLSVTVISAEDLPIVDFMGKADPFVVLALKKSEKKQKTRVVNETLNPVWNQTFDFVVEDGLHDMLIVELWDHDTFGKEKMGKVIMTLTKVILEGEYDETFILDDAKSGKINLHLKWTAQHKFREP* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0907 563 PRINTS C2 domain signature 455 467 IPR000008 -
Mal2g0907 563 PRINTS C2 domain signature 503 511 IPR000008 -
Mal2g0907 563 PRINTS C2 domain signature 481 494 IPR000008 -
Mal2g0907 563 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 1 562 IPR045050 GO:0008289
Mal2g0907 563 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 437 555 IPR035892 -
Mal2g0907 563 ProSiteProfiles C2 domain profile. 238 359 IPR000008 -
Mal2g0907 563 SMART C2_3c 439 537 IPR000008 -
Mal2g0907 563 SMART C2_3c 258 358 IPR000008 -
Mal2g0907 563 PANTHER SYNAPTOTAGMIN-4 1 562 - -
Mal2g0907 563 Pfam Synaptotagmin-like mitochondrial-lipid-binding domain 65 243 IPR039010 -
Mal2g0907 563 Gene3D C2 domain 435 561 IPR035892 -
Mal2g0907 563 Gene3D C2 domain 253 391 IPR035892 -
Mal2g0907 563 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 255 386 IPR035892 -
Mal2g0907 563 CDD C2 440 536 - -
Mal2g0907 563 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 60 244 IPR031468 GO:0008289
Mal2g0907 563 ProSiteProfiles C2 domain profile. 417 538 IPR000008 -
Mal2g0907 563 CDD C2 259 361 - -
Mal2g0907 563 Pfam C2 domain 257 361 IPR000008 -
Mal2g0907 563 Pfam C2 domain 438 538 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0907 Mal-Chr2 10509818 10515052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0907 253 504 Lipid Metabolism Gene Families AT3G61300 23.938 6.32e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0907 - - gmx:100787972 903.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0907 2 10509818 10515052 Mal2g0907 2 10509818 10515052 ECH