Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0793 ATGGATAATCAACCGAATCAAGTTCAATCGCCACGTGAAGAAGAGGAAGAGGAAGATTCATCGAGAATGGAAGATGAAGAGTTAATTTCAAAGGTTAACAAACTCATGGATAAAATCACTTCCTCTCCCGATAACCCTAAACCTAATGTTCTACACGCTCTTGCAACCATTCTTGAAACTCAAGAGTCCAAGTACATGGATGAGAATGCTCATTCATCTTCTACTAATGCTCGTGCTGCTCATAACATTGGACGCCTTGGGAGTATAATTCGGGAAAACGATGATTTCTTTGAGTTAATATCTTTGAAGTTTCTGTCAGAAAATCAATACTCGACTGCGGTTCGAGCTGCTTCTGTCAGACTTCTTTTGTGCTGTTCTCTAACTTGGATTTATCCCCATGTTTTTGAAGAACCGGTCCTTGAGAACTTAAACAATTGGGCGACAGAGGATAATACTAAGTTGTCGTCGGAGGAGCAAAACCTGAAGCGTGATCCGGTGAGAAAGGATGCCTCGGATTCTGAAATGTTGAAAGCATATTCTACTGGACTCCTTGCCGTGTGTTTGGTCGGCGGAGGTCAAATAGTGGAAGATGTATTGACATCTGGCTTGTCAGCTAAGCTTATGCGTTATCTTCGGTTGCGTGTGCTGGGCGAGACAAGTGGCAGCCAGAAAGATAGTAGTCATTTATCGGAGAACAAACACTCATCTGGGAATACTTCAGTGAGAGGTAGAGATGATGGTCGTGGAAGGTTTCGCCAGTTCCTGGAATCCAGTCATTTAGACGATACAAGGATGATTGAAGAGGGATCTTTAGATGACCAAGCTCCTGAACGGGGTCAGGATAGAAGCGTTAGTGGACAAGCTTGCCAAGAAGATCCTTGGATTGATGGTGAACCGCCTGATGGACTCAGCGAGGGTGCTGATGTCTGTGAGGTTGATTCTGATGGGGAGGAAAGATGGCGCTGTAGAGATATTCGTGATGGAAGGATAAAATACGGTGAGCATGAAGACAATGCTAGAGACGAATCTTCAAGGCGGCGTACTAACCGTGGATGGGGTAGGTCTAGGGGGAAAGGAAGGGTCAATGAAGGGCCAGTAGAAAGTGAACCCGTTTTGTCAGCTGCTGGTTCAGCCAGTCGGGTAGGACAGGGGAGGAGTGTTAGGGATAGGAGCTCATTGAGGAATGCTGACATTAAGCGGGTACCTGATTCTAAGAAGACTCTTACCAGTACTATTTCTGAGACTTTGATTTCCGAAAGAGAGGATAATGATGATTGTTTCCAAGAGTGCGGTATTGGAAGTAAAGATATCTCCGATCTTGTTCGGAAAGCAGTCCAAGCTGCTGAAGCTGAAGCTAGATCAGCCAATGCACCTGAAGAAGCCGTCAAAGCAGCTGGCGATGCTGCTGCTGACCTTGTTAAAACTGCAGCTTCAGAGGAATATAAATCCACCAATGATGAAGAAGCATCTGTTTTGGCTGCTTCGAGAGCTGCATCAACTGTTATTGATGCTGCATCTGCTGTTGAAGTTTCAAGGAGCTCTATCTGCATCAATACTGAGACAGAGAATGTTAGTAGCAGAGAAGCAGAATCTAGTGAGGATGTTGAAGATTATTTCATCCCAGACACTCAAACACTTACCCAATTAAGGGAAAAATATTGCATTCAGTGTCTTGCATTACTTGGAGAATATGTTGAAGTTCTTGGACCTGTATTGCACGAGAAGGGGGTTGATGTTTGTCTTGGACTTCTGCAGCAAAATTCTAAACATCAGGAGCCGTCCAAGGTTGCTTTTGTGTTGCCCGATGTCATGAAGCTGATATGCGCTTTGGCTGCCCATAGGAAATTTGCTGCACTATTTGCGGACCGTGGGGGAATGCAAAAGCTGCTTGCTGTCCCTAGAACGGCCCAAACATTCTTTGGCCTTTCTTCCTGTCTATTTACCATTGGTTCCCTTCAGGGGATAATGGAACGGGTTTGTGCTCTTCCATCCGATGTGATTTATCATGTGGTTGAGTTGGCTCTCCAACTCATTGAGTGCAATCAAGACCTAGCCCGGAAGAATGCAGCATTGTTTTTTGGTGCCGCATTTGTCTTCAGAGCAGTTCTCGATGCTTTTGACTCTCAGGATGGGTTACGGAAACTACTGGGCCTTCTCAATGATGCTGCTTCCATAAGATCAGGAGTAACTTCTGGAGCCTTGGGCTCGTCTAACTCAGGATCACTTCGAAATGATAGAACATCATCTGCAGAAGTGCTGACATCATCTGAGAAGCAGGTAGCCTATCACACCTGTGTTGCTCTGCGGCAATATTTCAGAGCACACCTCCTAGTATTAATAGATTCTATTCGTCCAAACAAAAGCAATCGTAGTTCTGTCAGAAATATTCCAAGTACAAGGGCAGCTTACAAGCCACTAGATATTAGTAATGAGGCAATGGATGCAGTTTTCTTACAATTACAAAAAGATCGGAAACTAGGTCCTGCATTTGTGAGAACAGGTTGGCGGGAAGTGGAGAAATTCTTGGCATCTAATGGGCATATTATTATGTTGGAATTGTGTCAGGCCCCACCTGTGGAGCGATATCTACATGATTTGCTTCAGTATGCATTGGGGGTTTTGCAAATTGTTACATTGGTACCTAGCAGTCGTAAAATGATTGTAAATGCAACATTAAGTACCAATCGTGCTGGTATTGCTGTAATTTTGGATGCAGCAAATATTGTCAATAGTCACGTGGACCCCGAGATAACTCAACCGGCATTAAATGTTCTAGTCAATCTTGTTTGCCCTCCTCCTTCAATTAGCATTAAACCACCTGCAGTGTCACAAGGCCAGCAGTTCCCGTCTTCACAAACCTCTAATGGTGCTCTCTCAGAGACTAGAGACAGAAATGCTGAACGTAATATCACAGATCGATCTGCTCAAGTCTCCAGCCATACTGATCCTAGGGAGAGGAATGGAGAGTCCAGTGCTGTAGATCGAGGCAGTAATGCAGCACTTAATACACAATCTGTGAATACTACTCCCCAAACTCCCGTTCCCTCTGCAAGTTCAGGCTTGGTTGGTGACCGAAGAATATCTTTGGGTGCAGGAGCACGCTGTGCCGGTCTTGCTACACAATTGGAACAAGGATATCATCAGGCAAGAGAGGCTGTCCGTAATAATAATGGTATAAAGGTTCTTCTGCATCTCCTCCAACCTCGCATATATTCACCTCCTGCTGCTCTGGACTGTCTTCGTGCTCTAGCTTGTCGGGTCCTGCTTGGATTAGCCAGAGATGATACTATTGCACATATATTAACAAAACTTCAGGTCGGGAAAAGACTGTCAGAACTAATTCGGGATTCAGGCAGCACGACACTTGGAACAGAACAGGGTAGGTGGCAAGCTGAACTATCCCAGGCTGCAATTGAGCTAATTGGGATTGTGGCTAATTTAGGGCGTGCAAGTACATTAGTTGCTAGTGATGCAGCTACTCCTGCATTAAGGCGCATTGAAAGGGCTGCTATAGCTGCTGCCACTCCTATTACTTACCCGTCGAGGGAACTCTTGCTCTTAATTCATGAACATTTACAGGCATCTGGATTGGGGCAAACTGCTTCTTTATTGCTTAAAGAGGCTCAGTTAACTTCTTTGCCATCATTACTTGCTCCATCTTCTCTTGCACAACAACCCACAATACAGGAAGCTTCTTCTACACAAATTCAGTGGCCTTCTGGTCGTACTCCTAGTGGGTTTCTCACTAGCAAATTGAAGTATAATTCAAAGAATGAGGATGCTTGCTTGAAAATTGATGCTGTCTCTGCAAAGAAAAAGTCTCTAACTTTCTCATCGTCTTTTGGTTCCCATACAAGACACCAAGTCATTGACTCTCGGCATTCATCAGCCCGAAAATGGTTACGTACTGGGAAAGAGTCTTCAGAAACTAGTACAATAGAAAATCCATCTGAATCTTCAGTAAAACATAACACTGAAACTGGATCTCAGTTCAAGACTCCAATCACCTTGCCGTCTAAACGAAAGTTATCGGATTTAAAGGACATGCCAATGTTTTCATCATCTGGAAAGCGACTAAATGTTGGGGATCAGGGACTACGCTCTCCTATTTGCTCAAGTTCAGTTCGTAAAGGCAGCCTGCATACTGATGCTGTTGGGCTTTTGACACCAACTAGTAATCTGAGGAGTCAACAAGGCCGTTGTACAGCTGACTATGTGGATGAGAATCAGTACTGCATCTCAAATCTAGGTCAGATGACACCATCCTCCCAAGTTCTGAATGACCTTCAGCCCAACAATCCTGAGCGTGTGACACTAGATTCTCTAGTGGTTCAGTATCTGAAACATCAGCATCGCCAATGCCCAGCTCCCATTACCACCCTTCCTCCAATATCTCTTCTGCACCCACATGTTTGTCCCGAACCTAAGCGAAGCCTCGATGCCCCCTCTAATGTGACTGCTCGGCTTGGTACCCGTGAATTTAAGTTTATGTATGGTGGAGTACATGGTAATCGCAAGGATCGTCAATTTGTTTTCAGCCGTTTTAGGCCATGGCGCACTTATCGGGACGATGCGGGAGCATTATTGACATGCATTACATTTGTTGGAGACTCTTCGCATATTGCTGTTGGTAGCCACACTGGAGAACTCAAATTTTTTGATTCAAACAACAATAATGTGGTAGAGAGCTTCACTGGTCACGAATCTCCCTTGACCCTTGTTCAATCTTTTGTTTCTGGTGAGACCCAATTGTTGCTTTCTTCGTGCTCTAAAGATGTTAAGCTGTGGGATGCAACATCAATATTAGCTGGTCCCACCCGTTCATTTGAAGGGTGCAAGGCTGCCAGGTTTAGTAATTCCGGGAAAACATTTGCTGCCTTGTCTTCAGAATCTACAGTACGGGAAATCCTTTTATATGATATCCAAGAAGGCAAGTTAGAAGCAACGTTGTCAGATACATTCACTACTTCCACAGGGCGGGGTCATGTTTATTCTCCAATCCACTTTAGCCCCGCCGATTCAATGCTACTTTGGAATGGTGTCTTATGGGACCCGCGAGAGCCTACGCCTGTTCATCGCTTTGATCAGTTCACTGATTATGGAGGTGGAGGCTTTCATCCTGCTGGAAATGAGGTTATTATAAACTCTGAAGTCTGGGATCTGCGCAAGTTCAGACTTCTACGTAGTGTAGCATCATTAGATCAGACAGCAATAACATTCAATGCTCGTGGTGATGTTATGTATGCAATCTTAAGGAGAAATGTTGAGGATGTAATGTCAGCTATGAACGCACGCCGTGTTAAGCATCCGCTTTATTCAGCTTTTCGCACAGTGGATGCAATAAATTATTCTGACATTGCTACCATCCCTGTGGATCGCTGTGTTCTTGATTTTGCAACCGAGCCAACAGATTCATTTGTTGGTTTGATTACCATGGATGATCAAGGTGATATGTATTCATCAGCCAGATCGTATGAAATTGGTCGTCGGAGGCCAACTGATGATGATTCTGATCCTGATGATGCTGAAAGTGAGGAGGAAGATGAAGATGACGACGACGATGACAATGAAGATCCTCTTTTAGGCCCTGGTTTTGGTGTGGGAAGCGACAGTGACGCTGATGATTTGAGCAGCGACGAAGATGATAGTGTAAGTGATCATGATGATGATGACGATGGAGGTTTCATGTTGGATGATGTAGACTTTGATGGACCTGACATAATGGATATTGGGACTGATGGTGATGAGGACGAAGATGATGATAGTCAAGGACTTGAATCCGGGAGTAGTGATGACGATTATGACTTTGATTATTAA 5817 0.4446 MDNQPNQVQSPREEEEEEDSSRMEDEELISKVNKLMDKITSSPDNPKPNVLHALATILETQESKYMDENAHSSSTNARAAHNIGRLGSIIRENDDFFELISLKFLSENQYSTAVRAASVRLLLCCSLTWIYPHVFEEPVLENLNNWATEDNTKLSSEEQNLKRDPVRKDASDSEMLKAYSTGLLAVCLVGGGQIVEDVLTSGLSAKLMRYLRLRVLGETSGSQKDSSHLSENKHSSGNTSVRGRDDGRGRFRQFLESSHLDDTRMIEEGSLDDQAPERGQDRSVSGQACQEDPWIDGEPPDGLSEGADVCEVDSDGEERWRCRDIRDGRIKYGEHEDNARDESSRRRTNRGWGRSRGKGRVNEGPVESEPVLSAAGSASRVGQGRSVRDRSSLRNADIKRVPDSKKTLTSTISETLISEREDNDDCFQECGIGSKDISDLVRKAVQAAEAEARSANAPEEAVKAAGDAAADLVKTAASEEYKSTNDEEASVLAASRAASTVIDAASAVEVSRSSICINTETENVSSREAESSEDVEDYFIPDTQTLTQLREKYCIQCLALLGEYVEVLGPVLHEKGVDVCLGLLQQNSKHQEPSKVAFVLPDVMKLICALAAHRKFAALFADRGGMQKLLAVPRTAQTFFGLSSCLFTIGSLQGIMERVCALPSDVIYHVVELALQLIECNQDLARKNAALFFGAAFVFRAVLDAFDSQDGLRKLLGLLNDAASIRSGVTSGALGSSNSGSLRNDRTSSAEVLTSSEKQVAYHTCVALRQYFRAHLLVLIDSIRPNKSNRSSVRNIPSTRAAYKPLDISNEAMDAVFLQLQKDRKLGPAFVRTGWREVEKFLASNGHIIMLELCQAPPVERYLHDLLQYALGVLQIVTLVPSSRKMIVNATLSTNRAGIAVILDAANIVNSHVDPEITQPALNVLVNLVCPPPSISIKPPAVSQGQQFPSSQTSNGALSETRDRNAERNITDRSAQVSSHTDPRERNGESSAVDRGSNAALNTQSVNTTPQTPVPSASSGLVGDRRISLGAGARCAGLATQLEQGYHQAREAVRNNNGIKVLLHLLQPRIYSPPAALDCLRALACRVLLGLARDDTIAHILTKLQVGKRLSELIRDSGSTTLGTEQGRWQAELSQAAIELIGIVANLGRASTLVASDAATPALRRIERAAIAAATPITYPSRELLLLIHEHLQASGLGQTASLLLKEAQLTSLPSLLAPSSLAQQPTIQEASSTQIQWPSGRTPSGFLTSKLKYNSKNEDACLKIDAVSAKKKSLTFSSSFGSHTRHQVIDSRHSSARKWLRTGKESSETSTIENPSESSVKHNTETGSQFKTPITLPSKRKLSDLKDMPMFSSSGKRLNVGDQGLRSPICSSSVRKGSLHTDAVGLLTPTSNLRSQQGRCTADYVDENQYCISNLGQMTPSSQVLNDLQPNNPERVTLDSLVVQYLKHQHRQCPAPITTLPPISLLHPHVCPEPKRSLDAPSNVTARLGTREFKFMYGGVHGNRKDRQFVFSRFRPWRTYRDDAGALLTCITFVGDSSHIAVGSHTGELKFFDSNNNNVVESFTGHESPLTLVQSFVSGETQLLLSSCSKDVKLWDATSILAGPTRSFEGCKAARFSNSGKTFAALSSESTVREILLYDIQEGKLEATLSDTFTTSTGRGHVYSPIHFSPADSMLLWNGVLWDPREPTPVHRFDQFTDYGGGGFHPAGNEVIINSEVWDLRKFRLLRSVASLDQTAITFNARGDVMYAILRRNVEDVMSAMNARRVKHPLYSAFRTVDAINYSDIATIPVDRCVLDFATEPTDSFVGLITMDDQGDMYSSARSYEIGRRRPTDDDSDPDDAESEEEDEDDDDDDNEDPLLGPGFGVGSDSDADDLSSDEDDSVSDHDDDDDGGFMLDDVDFDGPDIMDIGTDGDEDEDDDSQGLESGSSDDDYDFDY* 1939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0793 1938 SMART Lish 1180 1212 IPR006594 GO:0005515
Mal2g0793 1938 MobiDBLite consensus disorder prediction 1838 1859 - -
Mal2g0793 1938 PANTHER BNAA03G51310D PROTEIN 996 1288 - -
Mal2g0793 1938 MobiDBLite consensus disorder prediction 238 279 - -
Mal2g0793 1938 MobiDBLite consensus disorder prediction 335 399 - -
Mal2g0793 1938 SMART WD40_4 1557 1597 IPR001680 GO:0005515
Mal2g0793 1938 SMART WD40_4 1602 1640 IPR001680 GO:0005515
Mal2g0793 1938 SMART WD40_4 1514 1554 IPR001680 GO:0005515
Mal2g0793 1938 MobiDBLite consensus disorder prediction 335 349 - -
Mal2g0793 1938 MobiDBLite consensus disorder prediction 1873 1938 - -
Mal2g0793 1938 MobiDBLite consensus disorder prediction 940 1021 - -
Mal2g0793 1938 PANTHER VPRBP PROTEIN-RELATED 18 261 IPR033270 GO:0016567
Mal2g0793 1938 PANTHER BNAA03G51310D PROTEIN 320 954 - -
Mal2g0793 1938 PANTHER BNAA03G51310D PROTEIN 1273 1824 - -
Mal2g0793 1938 PANTHER BNAA03G51310D PROTEIN 18 261 - -
Mal2g0793 1938 MobiDBLite consensus disorder prediction 1 27 - -
Mal2g0793 1938 MobiDBLite consensus disorder prediction 992 1018 - -
Mal2g0793 1938 PANTHER VPRBP PROTEIN-RELATED 320 954 IPR033270 GO:0016567
Mal2g0793 1938 MobiDBLite consensus disorder prediction 1288 1305 - -
Mal2g0793 1938 MobiDBLite consensus disorder prediction 221 311 - -
Mal2g0793 1938 MobiDBLite consensus disorder prediction 221 237 - -
Mal2g0793 1938 Gene3D - 1515 1839 IPR015943 GO:0005515
Mal2g0793 1938 MobiDBLite consensus disorder prediction 940 960 - -
Mal2g0793 1938 PANTHER VPRBP PROTEIN-RELATED 996 1288 IPR033270 GO:0016567
Mal2g0793 1938 MobiDBLite consensus disorder prediction 1823 1938 - -
Mal2g0793 1938 MobiDBLite consensus disorder prediction 1306 1333 - -
Mal2g0793 1938 ProSiteProfiles LIS1 homology (LisH) motif profile. 1180 1212 IPR006594 GO:0005515
Mal2g0793 1938 MobiDBLite consensus disorder prediction 1288 1333 - -
Mal2g0793 1938 PANTHER VPRBP PROTEIN-RELATED 1273 1824 IPR033270 GO:0016567
Mal2g0793 1938 SUPERFAMILY WD40 repeat-like 1516 1749 IPR036322 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0793 K11789 - gmx:100796030 2855.86