Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0785 ATGGCCATTTCCCTCTACAACAACACTACACTTCCATTTCTTTCTCTCAATTCATCCAAATCCACTCTTACATCGATCCTCACAAATTCAACCACACGTTATCATTTCCCAACCATCGCCATGAACTTGTGCACCACCAAATCCGAACCCATAACCACTTCCTCAGCATCTTCTTCTTCCTCAATGCAGCACGTGCCAGAGCAAGATTCTAACGAAATGGAACGTGTTTGGAACCAAACATTCCAAAGGTACTCTTCCAACAATACCAAGAGGAGTGGTAAAGGTACGGCAATCGTGTGGTTTAGAAATGATCTCAGAGTTTTGGATAACGAGGCTCTCTACAAGGCTTGGCTCTCTTCTCAAACTCTCTTGCCTGTTTATTGTATTGATCCTCGACTCTTTGCCACCACTTACCATTTCGGATTTCCAAAAACCGGAGCATTGAGAACGCAATTTCTCCTTGAATGTTTGGCTGACTTGAAGAAGAATCTAATGAAACGGGGACTTAATTTGCTTATTCAACATGGCAAACCTGAAGATATTCTTCCTTCTCTAGCTAAAGCTTATGGAGCTCGTACAGTTTATGCACAGAAAGAAACTTGTAGCGAAGAGCTGGATGTTGAAAGGTCTGTCAACAAATGTCTTCAACAAGTGGTGGTACCATCCGACGGATCTGCTGGGGTGGCAACAACTTCTAACAGCCACCCCAAGTTACAGTTTGTTTGGGGCACCACTATGTACCACCGTGACGATCTTCCTTTTGATGTCACTAGCTTGCCGGATGTTTATACTCAGTTTCGTAAGACTGTTGAACCGAAATGTGTCGTGCGCTCATGCATCAAACTGCCAACATCACTTGGACCACCTCCACCAGTTGAGGATTGGGGATGTCTTCCTTCATTGGACCAGCTGGGACTTTCCTCACAAAATGTTAACAAGGGAATGAAATTTCTGGGGGGTGAAACTGCCGCATTGTGCAGAATATATGAATACTTTTGGAAGAAGGATTTACTAAAGGTATATAAAGAGACCCGAAATGGGATGTTAGGACCTGATTATTCTACTAAATTCTCACCATGGCTTGCATCCGGAAGCTTGTCTCCTCGTCTCATACACGAAGAGGTGAAGAGATATGAAAATGAAAGACAAGCAAATAGTTCTACCTACTGGGTTTTGTTCGAGTTGATATGGAGGGATTACTTTAGGTTTCTATCAGTCAAATATGGAAATTCACTTTTCCATATAGGTGGACCTAGAAATGTTCAGAAAAATTGGAGCCAAGACAAGAAATTATTTGAATCCTGGAGAGATGGTTGTACAGGGTATCCTCTGATAGATGCAAACATGAAAGAATTATCAACTACAGGTTTTATGTCAAACCGAGGACGGCAGATTGTGTGTTCCTTCCTAGTTCGTGATATGGGCATAGATTGGCGCATGGGAGCAGAATGGTTTGAAACATGTCTTTTGGATTATGATCCATGTTCTAATTATGGAAACTGGACTTATGGATCAGGAGTTGGGAATGATCCCAGAGAAGACCGATATTTCAGCATACCAAAACAAGCACAAGCATATGACCCAGAAGGTGAATATGTTGCATACTGGTTGCCACAGTTACGAGCAATCTCAAAAGATAAAAGGAATTTTCCTGGTAATTTATACATTCGTCAAATTGTGCCGCTCAAGTTTGGAACAACTAGTAGACGTAATGAGGACAAGTCACTTGGTGCAAGAAGAGGTAATGATAGGGGGAATGAGCGAAGATGGAACAGGAGATAA 1782 0.4214 MAISLYNNTTLPFLSLNSSKSTLTSILTNSTTRYHFPTIAMNLCTTKSEPITTSSASSSSSMQHVPEQDSNEMERVWNQTFQRYSSNNTKRSGKGTAIVWFRNDLRVLDNEALYKAWLSSQTLLPVYCIDPRLFATTYHFGFPKTGALRTQFLLECLADLKKNLMKRGLNLLIQHGKPEDILPSLAKAYGARTVYAQKETCSEELDVERSVNKCLQQVVVPSDGSAGVATTSNSHPKLQFVWGTTMYHRDDLPFDVTSLPDVYTQFRKTVEPKCVVRSCIKLPTSLGPPPPVEDWGCLPSLDQLGLSSQNVNKGMKFLGGETAALCRIYEYFWKKDLLKVYKETRNGMLGPDYSTKFSPWLASGSLSPRLIHEEVKRYENERQANSSTYWVLFELIWRDYFRFLSVKYGNSLFHIGGPRNVQKNWSQDKKLFESWRDGCTGYPLIDANMKELSTTGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGSGVGNDPREDRYFSIPKQAQAYDPEGEYVAYWLPQLRAISKDKRNFPGNLYIRQIVPLKFGTTSRRNEDKSLGARRGNDRGNERRWNRR* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0785 593 Gene3D HUPs 59 243 IPR014729 -
Mal2g0785 593 PRINTS DNA photolyase signature 460 478 IPR002081 -
Mal2g0785 593 PRINTS DNA photolyase signature 499 513 IPR002081 -
Mal2g0785 593 PRINTS DNA photolyase signature 440 456 IPR002081 -
Mal2g0785 593 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 315 548 IPR036134 -
Mal2g0785 593 Pfam DNA photolyase 97 275 IPR006050 -
Mal2g0785 593 MobiDBLite consensus disorder prediction 571 593 - -
Mal2g0785 593 Pfam FAD binding domain of DNA photolyase 393 547 IPR005101 -
Mal2g0785 593 Gene3D - 244 413 - -
Mal2g0785 593 PANTHER CRYPTOCHROME 81 571 IPR002081 -
Mal2g0785 593 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 414 568 - -
Mal2g0785 593 PANTHER CRYPTOCHROME DASH 81 571 - -
Mal2g0785 593 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 94 294 IPR036155 -
Mal2g0785 593 TIGRFAM crypto_DASH: cryptochrome, DASH family 96 539 IPR014133 GO:0003913|GO:0006281
Mal2g0785 593 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 95 228 IPR006050 -
Mal2g0785 593 MobiDBLite consensus disorder prediction 50 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0785 Mal-Chr2 9061515 9066436 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0785 K25656 - gmx:100783312 966.452
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0785 2 9061515 9066436 Mal2g0785 2 9061515 9066436 ECH