Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mal2g0757 | ATGACTCGCGTGTATATTGGAAATCTCGATTCACGAATTTCTGAGAGGGATCTTGAAGATGATTTCCATGTTTTTGGAGTCATACGAAGTGTGTGGGTTGCAAGGAGGCCTCCTGGTTATGCTTTCATTGACTTTGATGACCGCCGAGATGCGCTCGATGCTATCCGTGAATTAGATGGTAAAAATGGTTGGAGGGTAGAGCTTTCTCACAACTCTAAAACTGGAGGTGGAGGAGGAGGCAGAGGTGGTGGTGGCGGTGGTCGTGGTCGGTCTGGTGGGGGTGGTTCTGATTTGAAATGTTATGAGTGTGGTGAACCTGGTCATTTTGCCCGGGAGTGTCATTCTTCTCGTGGTGGTTCTGGAAGACGTAGGAGCCGCAGTCCCCCTCGATTTCGCAGGAGCCCAAGTTATGGGCGAAGGAGTTACAGTCCTCGTGAGCGGTCCCCAAGGAGACGCAGCCCTTCTCCTCGTAGACGCAGCCCTTCACCTCGCCGGCGCAGCTATAGCAGGTCACCACCTCCTTACCGTGGGCGTGAGGATGTAACACATGCTAACGGAAATGGGATAAGGGATGCACATCGAAGCAGAAGTTGA | 594 | 0.5236 | MTRVYIGNLDSRISERDLEDDFHVFGVIRSVWVARRPPGYAFIDFDDRRDALDAIRELDGKNGWRVELSHNSKTGGGGGGRGGGGGGRGRSGGGGSDLKCYECGEPGHFARECHSSRGGSGRRRSRSPPRFRRSPSYGRRSYSPRERSPRRRSPSPRRRSPSPRRRSYSRSPPPYRGREDVTHANGNGIRDAHRSRS* | 198 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mal2g0757 | 197 | SUPERFAMILY | Retrovirus zinc finger-like domains | 90 | 118 | IPR036875 | GO:0003676|GO:0008270 | |
| Mal2g0757 | 197 | PANTHER | SERINE/ARGININE RICH SPLICING FACTOR | 2 | 189 | - | - | |
| Mal2g0757 | 197 | SMART | rrm1_1 | 3 | 69 | IPR000504 | GO:0003723 | |
| Mal2g0757 | 197 | MobiDBLite | consensus disorder prediction | 109 | 197 | - | - | |
| Mal2g0757 | 197 | SMART | c2hcfinal6 | 99 | 115 | IPR001878 | GO:0003676|GO:0008270 | |
| Mal2g0757 | 197 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 2 | 73 | IPR000504 | GO:0003723 | |
| Mal2g0757 | 197 | PANTHER | SERINE/ARGININE-RICH SPLICING FACTOR RSZ22A-LIKE ISOFORM X1 | 2 | 189 | - | - | |
| Mal2g0757 | 197 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 4 | 61 | IPR000504 | GO:0003723 | |
| Mal2g0757 | 197 | Gene3D | - | 1 | 98 | IPR012677 | - | |
| Mal2g0757 | 197 | MobiDBLite | consensus disorder prediction | 151 | 165 | - | - | |
| Mal2g0757 | 197 | Pfam | Zinc knuckle | 99 | 113 | IPR001878 | GO:0003676|GO:0008270 | |
| Mal2g0757 | 197 | MobiDBLite | consensus disorder prediction | 66 | 94 | - | - | |
| Mal2g0757 | 197 | SUPERFAMILY | RNA-binding domain, RBD | 2 | 96 | IPR035979 | GO:0003676 | |
| Mal2g0757 | 197 | Gene3D | - | 99 | 164 | - | - | |
| Mal2g0757 | 197 | MobiDBLite | consensus disorder prediction | 172 | 197 | - | - | |
| Mal2g0757 | 197 | CDD | RRM_SRSF3_like | 3 | 71 | - | - | |
| Mal2g0757 | 197 | ProSiteProfiles | Zinc finger CCHC-type profile. | 99 | 113 | IPR001878 | GO:0003676|GO:0008270 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mal2g0757 | Mal-Chr2 | 8831920 | 8834598 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mal2g0757 | K12896 | - | csin:114261802 | 203.756 |
Event-related genes