Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0732 ATGGGAACAATTTTCATAAGAGAACTCGAAAACCGTTACATAACCTCATTGAAAAACTGCTTCAAAATAACAGAACTAAAGAAGATTCACGCTCACGTCGTAAAGCTATCACTTTCACAGAGCAACTTTTTAGTCACAAAAATGTTGGACTCATGCGACAAAATGGGTCACGTGAGTTACGCTACCTTGCTCTTCAAGCAACTCCTTCACCCAAATGTCTTCACCTACAACGCTATCATCAGAACTTACACTCACAATCGCCACTATTCTTCAGCAATCACTCTCTTTATCCAAATGCTCACACATTCAACAGAATTTGTTTTTCCAGACAAATTCACGTTCCCTTTTGTGATTAAATCATGTGCTGGGATTCTGTGTCGTAGTATTGGTATGCAGGTTCATGGGCTAGTTTTCAAATTTGGGGCTAATAACCATTGTATAACGGAGAATGCATTGATTGATATGTATACGAAATTTGAGGATTTGACCAATGCGTGCAAGGTGTTTGAGGAAATAGGTGATAGGGATGTGATTTCTTGGAATAGTTTGATATTTGGGTATGTGAAATTGGGGCAGATGAAGAGTGCAAGGGAATTGTTTGATGAAATGCCTGTTAGGACAATTGTGTCTTGGACAACTATGATAACTGGGTATGGGAGAATGGGTTGTTATGGTGATGCGTTGGATGTATTTCGGGAGATGCAAATGGTGGGTATTGAACCGGATGAGATTAGTATTATAGCTGTTTTGCCGGCCTGTGCACAGCTTGGAGCTCTTGAGGTTGGGAAATGGATTCATATGTATGCAGACAAAAATGGGTTTTTGAGGAAGACTGGTATATGTAATGCATTGGTTGAAATGTATGCTAAGTGTGGTTGTATTGATGAAGCTTGGAGCTTGTTTGATCAGTTGGTTGAGAAGGATGTGATTTCTTGGAGTACCATGATTGGAGGGCTAGCTAATCATGGGAAAGGTTATGAGGCAATTCAACTCTTTGAACAAATGCGGAAGGTGCGAGTCGCTCCTAATGAGATAACCTTTCTTGGTGTTTTGCTGGCTTGCTCTCATGCAGGCTTGTGGGATGAGGGGTTGAGATATTTTGATGTTATGAGTGTGGATTATCATATAGAACCAGAAATTGAGCATTATGGTTGCCTCGTTGATCTTCTTGGACGCTCGGGACGCCTTGGTCAGGCTCTTGACACAATAGCGAAGATGCCAATAAAGCCAGATTCAAGGATATGGAACTCTTTGTTAAGTTCGTGTAGGATTCATCGCAATCTTGAGAATGCTGTCATTGCAATGAAACAACTCATGGAGCTTGAGCCAGAGGAATCTGGAAACTATGTGTTGCTCGCGAACATATATGCAGAACATGGCAAGTGGGAAGATGTATCAAATATTAGGAAACTCATAAGAAACAAGAGGATAAAGAAAACCCCAGGGAGTAGTTCGATTGAGGTTAACAATGTGGTTCAAGAATTTGTATCATCTGACGACTCAAAGCCATTTTCACAAGAGGTCTTTTGGATCCTAGAAGGGCTGGCTTTAAATCAAACTAGAACTAATGACTTGATGGAAGAAGAAGATGCTGATAAAAGTTCACTGTAA 1611 0.4053 MGTIFIRELENRYITSLKNCFKITELKKIHAHVVKLSLSQSNFLVTKMLDSCDKMGHVSYATLLFKQLLHPNVFTYNAIIRTYTHNRHYSSAITLFIQMLTHSTEFVFPDKFTFPFVIKSCAGILCRSIGMQVHGLVFKFGANNHCITENALIDMYTKFEDLTNACKVFEEIGDRDVISWNSLIFGYVKLGQMKSARELFDEMPVRTIVSWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEISIIAVLPACAQLGALEVGKWIHMYADKNGFLRKTGICNALVEMYAKCGCIDEAWSLFDQLVEKDVISWSTMIGGLANHGKGYEAIQLFEQMRKVRVAPNEITFLGVLLACSHAGLWDEGLRYFDVMSVDYHIEPEIEHYGCLVDLLGRSGRLGQALDTIAKMPIKPDSRIWNSLLSSCRIHRNLENAVIAMKQLMELEPEESGNYVLLANIYAEHGKWEDVSNIRKLIRNKRIKKTPGSSSIEVNNVVQEFVSSDDSKPFSQEVFWILEGLALNQTRTNDLMEEEDADKSSL* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0732 536 SUPERFAMILY TPR-like 72 464 IPR011990 GO:0005515
Mal2g0732 536 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 176 206 IPR002885 -
Mal2g0732 536 TIGRFAM PPR: pentatricopeptide repeat domain 280 309 IPR002885 -
Mal2g0732 536 TIGRFAM PPR: pentatricopeptide repeat domain 178 204 IPR002885 -
Mal2g0732 536 TIGRFAM PPR: pentatricopeptide repeat domain 310 344 IPR002885 -
Mal2g0732 536 TIGRFAM PPR: pentatricopeptide repeat domain 74 101 IPR002885 -
Mal2g0732 536 TIGRFAM PPR: pentatricopeptide repeat domain 209 243 IPR002885 -
Mal2g0732 536 PANTHER OS05G0439300 PROTEIN 6 529 - -
Mal2g0732 536 Pfam PPR repeat family 207 254 IPR002885 -
Mal2g0732 536 Pfam PPR repeat family 307 354 IPR002885 -
Mal2g0732 536 Pfam PPR repeat family 71 122 IPR002885 -
Mal2g0732 536 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 72 106 IPR002885 -
Mal2g0732 536 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 6 529 - -
Mal2g0732 536 Gene3D Tetratricopeptide repeat domain 263 514 IPR011990 GO:0005515
Mal2g0732 536 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 308 342 IPR002885 -
Mal2g0732 536 Pfam PPR repeat 150 175 IPR002885 -
Mal2g0732 536 Pfam PPR repeat 178 204 IPR002885 -
Mal2g0732 536 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 277 307 IPR002885 -
Mal2g0732 536 Pfam E motif 425 487 IPR046848 -
Mal2g0732 536 Gene3D Tetratricopeptide repeat domain 11 126 IPR011990 GO:0005515
Mal2g0732 536 Gene3D Tetratricopeptide repeat domain 206 262 IPR011990 GO:0005515
Mal2g0732 536 Gene3D Tetratricopeptide repeat domain 127 205 IPR011990 GO:0005515
Mal2g0732 536 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 207 241 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0732 Mal-Chr2 8574859 8576469 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0732 27 515 Glycoside Hydrolase AT3G49170 30.957 3.50e-82 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0732 - - cam:101511241 932.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0732 2 8574859 8576469 Mal2g0732 2 8574859 8576469 ECH