Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0674 ATGGAAGACGCCGGAAGTTATCGAAACCCCGACAACCTATCACGCAAGATTGTTGACGTCGCTGCTGGTGAATCACACAGTATCCTTCTTACCGGAGATGGCAGTGTGTACTGTTGGGGTAGAGGAATGTTTGGTCGGCTTGGTCTTGGTTCTCAAAAAGATGAATTTTTCCCAGTTAAGGTTAACTTTGCAAATCCTAATGGAACTGAAGACAGTTTCAAAATAGTGGGAATTGCTGCTGGTTCATATCACAGTCTTGCTCTTGCAGAAGATGGATCTGTTTGGTGTTGGGGTTACAATATCTGTATCCTTAATATGCTTGGAAAGGAGGACTCGCATGATTCCATAGTTCCTTGCTTACTTAGCAGGTTTCTTGAGTTGCAAGTGCTCAATTCTTCAACAGACCTATCTGAAGCAGAAGACAAAGCACCGCTAAAGATGTGCACTGTCAAAGCAGGAGGAATGATGTCTCTGGCTATTGATAATCGCGGGACCCTGTGGATATGGGGAAACATCCCACAAGAAAGCAAAGAAGGTGGGTTAGCTCTTGTAAGCAGTTTCACTCCAACACCAGTCTGGGATTTTCATGGTCGAGCTGTTGTCAAGGTTGCATGTGGAAACGAGCATGTTGTAGCTCTGGTTAGTGCGACAGAATCACACAAGGATGAAGATCTGCTGTGCTACTCTTGGGGGCATAACAGCCATGGCCAATTAGGCTTAGGGGATAGGCAGGGCAGGCTACATCCAGAAGTTGTAAAAATACTCGACGAGGAGTCTCCTTGGACAACTTACGAAGTAGCCTGTGGTGCATTTCACACTGCTTTGCTCGCTAACAAAACAAAACCTGACAACACATTAGAAAGCATGTGCTGGACCTTTGGCCTTGGTGAGAATGGCCAACTTGGACATGGAACAACGCAAAGTACTTTATTTCCTACACCCGTTAAAGAATTGCCACAAAATGTACATCTTATTTCTGTTGACTGTGGTTTGTTTCATACAAGTGTTGTTTCCTCAACTGGGGATGTGTGGTCATGGGGAATGGAGAAGGGTCTTGGCTTATGTCCTGATGCTAATCGTGCTGAAACAAATTCTGGTGGTGACGCCCTCTCTCCTCTTCTCATCTCATGCAAGTCACATCAACCTATTTTTCCGGGTCCTGTTAAAGTCGCGTGTGGGGCTGCACATACTGTTGTTGTTGCTCAGGAGGGACATAAGGTGTGGTCTTGGGGTAGGGGAAGGAGTGGAGTTCTTGGGAATGGTAAAGAAATGGATAGTTACACTCCCACCATTGTTCTGTGGCCTCCAACGATGGAGGATCTCAAGGAAGAGGAGTTAAATAGCTCTGATGAGCAAGATAAGGTCGCAGAAAAGAAAACCGAAGTAATAACAGAAACAGACGAGAAATTATCCTCGGCGTTGAATGAGCTGAAGCTGCTACAAACAAAGCTATCTGTAATGGAAAGATATGCTAGTATACTTCATGGTTCAATTTTTGGAAAACCTTTTGATGAGCAACAAGATATCCCTGTTTCAATGCGGAATTCGGGTTCAATGGATATTGCAAAAGAATGGGATAACATGTTAGAGGCAGCAGATGATAGGAAGCTAGTCAGGATGGAAATGTTTTACCGTGACATGCTAACTGGTGTGAAAGATAAATTAATGAAGAGAAAGATCAAAGAAATTATAAAGGAGTGTCTCCAATCTTCCGAGGTAAATAAATAA 1728 0.4387 MEDAGSYRNPDNLSRKIVDVAAGESHSILLTGDGSVYCWGRGMFGRLGLGSQKDEFFPVKVNFANPNGTEDSFKIVGIAAGSYHSLALAEDGSVWCWGYNICILNMLGKEDSHDSIVPCLLSRFLELQVLNSSTDLSEAEDKAPLKMCTVKAGGMMSLAIDNRGTLWIWGNIPQESKEGGLALVSSFTPTPVWDFHGRAVVKVACGNEHVVALVSATESHKDEDLLCYSWGHNSHGQLGLGDRQGRLHPEVVKILDEESPWTTYEVACGAFHTALLANKTKPDNTLESMCWTFGLGENGQLGHGTTQSTLFPTPVKELPQNVHLISVDCGLFHTSVVSSTGDVWSWGMEKGLGLCPDANRAETNSGGDALSPLLISCKSHQPIFPGPVKVACGAAHTVVVAQEGHKVWSWGRGRSGVLGNGKEMDSYTPTIVLWPPTMEDLKEEELNSSDEQDKVAEKKTEVITETDEKLSSALNELKLLQTKLSVMERYASILHGSIFGKPFDEQQDIPVSMRNSGSMDIAKEWDNMLEAADDRKLVRMEMFYRDMLTGVKDKLMKRKIKEIIKECLQSSEVNK* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0674 575 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 341 403 IPR000408 -
Mal2g0674 575 Coils Coil 463 483 - -
Mal2g0674 575 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 288 340 IPR000408 -
Mal2g0674 575 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 78 88 IPR000408 -
Mal2g0674 575 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 4 575 - -
Mal2g0674 575 Gene3D - 3 222 IPR009091 -
Mal2g0674 575 Gene3D - 223 473 IPR009091 -
Mal2g0674 575 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 20 30 IPR000408 -
Mal2g0674 575 PRINTS Chromosome condensation regulator RCC1 signature 75 88 IPR000408 -
Mal2g0674 575 PRINTS Chromosome condensation regulator RCC1 signature 164 180 IPR000408 -
Mal2g0674 575 PRINTS Chromosome condensation regulator RCC1 signature 330 348 IPR000408 -
Mal2g0674 575 PRINTS Chromosome condensation regulator RCC1 signature 203 219 IPR000408 -
Mal2g0674 575 PRINTS Chromosome condensation regulator RCC1 signature 35 51 IPR000408 -
Mal2g0674 575 PRINTS Chromosome condensation regulator RCC1 signature 400 421 IPR000408 -
Mal2g0674 575 Pfam Regulator of chromosome condensation (RCC1) repeat 341 400 IPR000408 -
Mal2g0674 575 Pfam Regulator of chromosome condensation (RCC1) repeat 33 88 IPR000408 -
Mal2g0674 575 Pfam Regulator of chromosome condensation (RCC1) repeat 291 336 IPR000408 -
Mal2g0674 575 Pfam Regulator of chromosome condensation (RCC1) repeat 227 276 IPR000408 -
Mal2g0674 575 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 164 216 IPR000408 -
Mal2g0674 575 Coils Coil 441 461 - -
Mal2g0674 575 SUPERFAMILY RCC1/BLIP-II 12 432 IPR009091 -
Mal2g0674 575 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HERC2-LIKE PROTEIN 4 575 - -
Mal2g0674 575 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 225 279 IPR000408 -
Mal2g0674 575 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 34 91 IPR000408 -
Mal2g0674 575 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 92 163 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0674 Mal-Chr2 7908820 7911366 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0674 - - gmx:100815199 885.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0674 2 7908820 7911366 Mal2g0674 2 7908820 7911366 ECH