Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0628 ATGAATAAGAGACCAAAGAAATCAGAGTCAAATAGGAGAGGAAAAAGAAGAAAGCCATCCGGTGTTTTTTCACCGTTGGATGTACCTGCGAGTGTCGTGTTCCGTTTGCTATGCCCTGGGAGTAAAATTGGTGGTGTAATTGGTAAAGGTGGTTCCATTATATCGCAAATTCGCCACGAAACCGGTGTGAAAGTTAAAATTGAAGAACCTGTTCCGGGTTGCGAAGAAAGGGTTATAACTTTTTTAAAAGAGAGTGATGAAGGTAGTGCTGAGCAAGGAAAGGAGGTTAATAATAATGAGGGTGAAAGCGAGGGGAAGGATGATGATGTGAAAGGGAATGGTGATGATAATGAAGATATAGATTCTGTTTCCGCTGAAGATTCCCAGAGCGAGAAGGTGAATTCGAATTTGGCTATTTTGAAGGCTGTAATGCTAGTTTTTGAGAGGGTGGCGGAAGGAATAGAGGATGTAGGTGAAGGTGGTGATGAAAGTAAAAAAGGTTCTTACTTTGTTTTGAGGCTACTCATCCTCTCTAATCAAGTTGGATGCATTTTGGGAAAGGGTGGCAGTGTGATAAAGAGAATGTCAGCTGAAAGTGGGGCGCAGATTCGGATCCTTCCTAAAGAAGAAATTCCCGCGTGTGCGTCCGATTCTGATGAGTTAGTTCAGATCACAGGAGGAGTAGAAGTTGTCAGGAAAGCTCTGCAATTTGTTTTTCAGCAGCTTGTGAAAAATACACCTCACGATTATGAATCTCTGTCTACCAATCTTTCCGGGCCGTCATCTCAATCATATGGCCAATTTCCACCAAATAAACGCACTTTCGCTGGTCAAGGAGCATCTTTTGCTACTGGGCCTAATGAAATTCCTGTTTTCCATTCTGCTCCCATGTTTCCGAAATTTCACGAAGGTGCCATCCATGGTCGCATGAGGCCTTCACCGGAAATGCTTACTTTCCGTTTATTGTGTCCTTCTGAAAATGTAGGAAATTTAATTGGCAAAGGGGGATCAATCATTAGGACTATGCAACTTGAGACAGCTAGTGAAATCAACGTTATAGAAGCCATTCCGGGTTCAGAGGACTGCATTGTCATCATATCTGGTCCAGCGCACCCAGATGATAGAATATCTCCTGTGCAAGAGGCTGTATTTCGTGTGCAAAATAGAATATCCAGGGCTGTACCTGATGCCAAAGAGCACAGTATGTTAGCAAGGGTTATTGTTTCTTCCAATAATATAGGTTGTCTCCTAGGGAAGGGTGGCTGCATCATAGCTGAAATGAGGAATTTATCAGGTGCCCATATTCGTATGCTGGGAAAGGATAAAGGTCCAAAGTGTGTTTCAGAAGATGATGAAGTAATTCAGGTGAGTGGAGTAATCGAGGCAGTGCATGATGCTCTTTTGCAAATAACGACAAGATTAAGAAATAATTTCTTTCGCGATGCATTTCCATCTGCCAATTTTCCCTCAAATTCTGCATTTCTGGATCAACATTCTGCATTCCCACCTTATTTGGGAAGACGGGGACTTTCACCTCCCGGAATGTATTCTGACCTAGGTCTGCCACATCCACATGGTGGTTTTCCCCTTGATGATCATCCTCCTTTTATGAATAATATGTATAGACCAGGCATTCCTCCTCACATATCTGAAAGGAAGCCTTGGGGTCCTAAGGGGATACTTGAAGGTGGTGGACACATGGGCTTGCCAGAATTTGCAGGAGGTCCCCGAAGAATTTCTGGATTTGCAGGAGGGAGCCAACCGATTATCACAAGTACTACTGTTGAAGTTGTTGTTCCTCGAGCTCTGGTGGCTGAAATATACGGTGAAGATGGTGAATGCCTGAAACAGATACTTCAGATCTCTGATGCAAATGTTATTATTACTGATTCAAAACCTGGAGCTGTGGAAACTAAAATTATAATATCTGGAACCCCGGAGCAAACTAATGCTGCACAAAGTCTTATTCAGGCATTTGTCATGAGTGAGAGGGAGTCTGGTTGA 2004 0.4306 MNKRPKKSESNRRGKRRKPSGVFSPLDVPASVVFRLLCPGSKIGGVIGKGGSIISQIRHETGVKVKIEEPVPGCEERVITFLKESDEGSAEQGKEVNNNEGESEGKDDDVKGNGDDNEDIDSVSAEDSQSEKVNSNLAILKAVMLVFERVAEGIEDVGEGGDESKKGSYFVLRLLILSNQVGCILGKGGSVIKRMSAESGAQIRILPKEEIPACASDSDELVQITGGVEVVRKALQFVFQQLVKNTPHDYESLSTNLSGPSSQSYGQFPPNKRTFAGQGASFATGPNEIPVFHSAPMFPKFHEGAIHGRMRPSPEMLTFRLLCPSENVGNLIGKGGSIIRTMQLETASEINVIEAIPGSEDCIVIISGPAHPDDRISPVQEAVFRVQNRISRAVPDAKEHSMLARVIVSSNNIGCLLGKGGCIIAEMRNLSGAHIRMLGKDKGPKCVSEDDEVIQVSGVIEAVHDALLQITTRLRNNFFRDAFPSANFPSNSAFLDQHSAFPPYLGRRGLSPPGMYSDLGLPHPHGGFPLDDHPPFMNNMYRPGIPPHISERKPWGPKGILEGGGHMGLPEFAGGPRRISGFAGGSQPIITSTTVEVVVPRALVAEIYGEDGECLKQILQISDANVIITDSKPGAVETKIIISGTPEQTNAAQSLIQAFVMSERESG* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0628 667 ProSiteProfiles Type-1 KH domain profile. 169 238 - -
Mal2g0628 667 CDD PCBP_like_KH 405 471 - -
Mal2g0628 667 ProSiteProfiles Type-1 KH domain profile. 592 656 - -
Mal2g0628 667 Pfam KH domain 594 657 IPR004088 GO:0003723
Mal2g0628 667 Pfam KH domain 172 236 IPR004088 GO:0003723
Mal2g0628 667 Pfam KH domain 34 80 IPR004088 GO:0003723
Mal2g0628 667 Pfam KH domain 318 370 IPR004088 GO:0003723
Mal2g0628 667 Pfam KH domain 405 470 IPR004088 GO:0003723
Mal2g0628 667 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 399 481 IPR036612 GO:0003723
Mal2g0628 667 Gene3D K Homology domain, type 1 591 664 IPR036612 GO:0003723
Mal2g0628 667 CDD PCBP_like_KH 171 239 - -
Mal2g0628 667 Gene3D K Homology domain, type 1 315 393 IPR036612 GO:0003723
Mal2g0628 667 Gene3D K Homology domain, type 1 29 95 IPR036612 GO:0003723
Mal2g0628 667 ProSiteProfiles Type-1 KH domain profile. 401 470 - -
Mal2g0628 667 MobiDBLite consensus disorder prediction 84 129 - -
Mal2g0628 667 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 309 371 IPR036612 GO:0003723
Mal2g0628 667 ProSiteProfiles Type-1 KH domain profile. 31 97 - -
Mal2g0628 667 MobiDBLite consensus disorder prediction 1 25 - -
Mal2g0628 667 Gene3D K Homology domain, type 1 166 245 IPR036612 GO:0003723
Mal2g0628 667 Gene3D K Homology domain, type 1 399 477 IPR036612 GO:0003723
Mal2g0628 667 SMART kh_6 400 475 IPR004087 GO:0003676
Mal2g0628 667 SMART kh_6 591 661 IPR004087 GO:0003676
Mal2g0628 667 SMART kh_6 168 243 IPR004087 GO:0003676
Mal2g0628 667 SMART kh_6 30 151 IPR004087 GO:0003676
Mal2g0628 667 SMART kh_6 315 391 IPR004087 GO:0003676
Mal2g0628 667 ProSiteProfiles Type-1 KH domain profile. 316 383 - -
Mal2g0628 667 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 25 81 IPR036612 GO:0003723
Mal2g0628 667 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 160 244 IPR036612 GO:0003723
Mal2g0628 667 MobiDBLite consensus disorder prediction 84 118 - -
Mal2g0628 667 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 6 529 - -
Mal2g0628 667 MobiDBLite consensus disorder prediction 1 19 - -
Mal2g0628 667 CDD PCBP_like_KH 318 387 - -
Mal2g0628 667 PANTHER KH DOMAIN-CONTAINING PROTEIN HEN4-LIKE 6 529 - -
Mal2g0628 667 CDD KH-I 594 657 - -
Mal2g0628 667 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 592 661 IPR036612 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0628 Mal-Chr2 7392837 7396498 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0628 K21444 - gmx:100785136 934.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0628 2 7392837 7396498 Mal2g0628 2 7392837 7396498 ECH