Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0610 ATGGCCGTTTCAACCACTTTCTCCGGTCCCAAATTGGAGTCACTATTCCTCAAATGTTCTTCACCGTCCACTCCCACCCATTTATCAGTTTTTGGGAAACCCAGAGCCACTTTCATTCAAAAAGGGATTATTCGATGTGATGCTCAAAATTCTGATCAAAGTAATGCTGGTGGTAGCACTCTCTCTGCTCTTGAACTGCTCAAAACTTCTGCAGCTGATAGGTATACAAAGGAAAGGAGCAGCATTGTTGTCATTGGGCTCAGTGTGCACACTGCTCCGGTAGAAATGCGAGAAAAACTTGCCATTCCAGAAGCGGAATGGCCTAGAGCTATTGCAGAGCTTTGCAGTCTCAATCATATTGAAGAAGCAGCTGTTCTGAGTACCTGTAACCGAATGGAGATATATGTTGTTGCTCTATCCCAACACCGTGGTGTCAAAGAGGTCATGGAATGGATGTCAAAAACAAGTTCTGTTCCTGTTTCAGAGCTTTGTGAGCACCGGTTTTTACTTTACAACAAAGATGCCACACAGCATCTTTTTCAAGTGTCAGCGGGTCTTGAGTCTCTTGTATTGGGAGAAGGTCAAATCCTTGCTCAGGTTAAGCAAGTTGTCAAAGTTGGACAAGGAGTTAACGGTTTTGGAAGAAACATTAGTGGTCTATTCAAGCATGCAATAACTGTTGGAAAAAGGGTTAGAGCGGAGACTAATATTGCTGCTGGGGCAGTTTCTGTGAGCTCAGCCGCTGTTGAGTTGGCCTATATGAAGCTACCTGAAGCCTCACATGATAATGCCAGGATGCTGATTATCGGTGCTGGGAAGATGGGAAAACTTGTGATCAAACATTTGGTTTCGAAAGGTTGCACAAGGATGGTTGTTGTCAATAGAACTGAGGAGAGAGTTGCTGCGATACGTGAAGAACTGAAGGATATTGAAATAATTTACAAACCTCTTTCAGAAATGCTCTCTTGTGTTTGTGAAGCAGATGTAGTATTCACCAGTACAGCATCAGAAAACCCATTATTCATGAAAGATGATGTCAAGGACCTTCCTCCAGCAAGTCAAGATGGTGGAGGCCTTCGCCTTTTCGTTGACATTTCTGTTCCTCGAAATGTCGGTTCATGTGTCTCAGATATTGAATCTGTGCGAGTTTACAATGTTGATGACCTTAAAGAGGTTGTGGCTGCCAACAAAGAGGACCGGCTTAGAAAAGCAATGGAAGCGCAGGCAATCATTGGTGAAGAGTTAAAACAATTTGAAGCTTGGAGAGACTCGCTGGAAACTGTTCCTACCATTAAAAAATTGAGAGCTTATGCTGAAAGGATCAGGGTTGCCGAGCTTGAGAAATGCTTGGGTAAGATGGGTGATGATATCTCAAAGAAGACGCGGAAAGCTGTGGATGATCTAAGTCGGGGTATTGTGAATAGGATGCTTCATGGTCCAATGCAACATTTAAGGTGTGATGGGAGTGACGACCGGACCCTAACTGAGACCCTTGAGAACATGCATGCTTTGAATAGAATGTTCAGCCTCGAGACTGAAATATCTGTTTTGGAGCAGAAGGTTCGAGCTAAGGTGGAACAAAACCAGAAGTGA 1593 0.4375 MAVSTTFSGPKLESLFLKCSSPSTPTHLSVFGKPRATFIQKGIIRCDAQNSDQSNAGGSTLSALELLKTSAADRYTKERSSIVVIGLSVHTAPVEMREKLAIPEAEWPRAIAELCSLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVMEWMSKTSSVPVSELCEHRFLLYNKDATQHLFQVSAGLESLVLGEGQILAQVKQVVKVGQGVNGFGRNISGLFKHAITVGKRVRAETNIAAGAVSVSSAAVELAYMKLPEASHDNARMLIIGAGKMGKLVIKHLVSKGCTRMVVVNRTEERVAAIREELKDIEIIYKPLSEMLSCVCEADVVFTSTASENPLFMKDDVKDLPPASQDGGGLRLFVDISVPRNVGSCVSDIESVRVYNVDDLKEVVAANKEDRLRKAMEAQAIIGEELKQFEAWRDSLETVPTIKKLRAYAERIRVAELEKCLGKMGDDISKKTRKAVDDLSRGIVNRMLHGPMQHLRCDGSDDRTLTETLENMHALNRMFSLETEISVLEQKVRAKVEQNQK* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0610 530 PANTHER GLUTAMYL-TRNA REDUCTASE 1, CHLOROPLASTIC 1 530 - -
Mal2g0610 530 Pfam Glutamyl-tRNAGlu reductase, dimerisation domain 406 510 IPR015896 GO:0008883|GO:0033014|GO:0050661
Mal2g0610 530 Gene3D - 241 393 - -
Mal2g0610 530 ProSitePatterns Glutamyl-tRNA reductase signature. 178 201 IPR018214 GO:0008883
Mal2g0610 530 CDD NAD_bind_Glutamyl_tRNA_reduct 82 404 - -
Mal2g0610 530 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 240 400 IPR036291 -
Mal2g0610 530 Pfam Glutamyl-tRNAGlu reductase, N-terminal domain 85 235 IPR015895 GO:0008883|GO:0033014|GO:0050661
Mal2g0610 530 SUPERFAMILY Glutamyl tRNA-reductase catalytic, N-terminal domain 81 237 IPR036343 GO:0008883|GO:0033014|GO:0050661
Mal2g0610 530 Coils Coil 293 313 - -
Mal2g0610 530 Pfam Shikimate / quinate 5-dehydrogenase 251 392 IPR006151 -
Mal2g0610 530 Gene3D - 80 240 IPR036343 GO:0008883|GO:0033014|GO:0050661
Mal2g0610 530 PANTHER GLUTAMYL-TRNA REDUCTASE 1 530 - -
Mal2g0610 530 TIGRFAM hemA: glutamyl-tRNA reductase 82 492 IPR000343 GO:0008883|GO:0033014|GO:0050661
Mal2g0610 530 Hamap Glutamyl-tRNA reductase [hemA]. 81 508 IPR000343 GO:0008883|GO:0033014|GO:0050661
Mal2g0610 530 SUPERFAMILY Glutamyl tRNA-reductase dimerization domain 404 493 IPR036453 GO:0008883|GO:0033014|GO:0050661
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0610 Mal-Chr2 7100616 7102978 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0610 K02492 - gmx:100782247 877.856
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0610 2 7100616 7102978 Mal2g0610 2 7100616 7102978 ECH