Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mal2g0609 | ATGGGTACTGGATGGAGAAGAGCCTTTTGCACAAGAGACCCTGAATCTACTATATCAGATAATAAGAACAACAACAACAACAACGGAAGTCCAAGTCCTAGCCCAAGAAGCTGTGCTCGGTTGAGTTTTCTTTCTGGAGGAGGTAGTAGTAATCCTTCCACTCCACGTTTGCAACAATCTAAATCTCAACCAGTTTCTAGTCCAAGTCTTCGTTGTCGTACAATAACTGAAGCAGCTTCTCAAATTACAAATGATAGCCCCAGATTTCTTAGTAGCAAAAGTAGCACACCAAGATCAACAAAATCTAACTCAATATCAAATCCAACTTCTCCTCGCTCTCCTTTGAAGTTGTCCCTCTTCAAAAACAGCTTCAAATTCAGAAGTAGCTGTGGAATCTGTTTGAACAGCGTGAAAACGGGACAGGGGATGGCAATATACACAGCAGAATGTGCACATGCTTTTCATTTCCCGTGTATAGCAGCACATGTACGCAACCATGCTACCCTTGTTTGCCCTGTCTGCAACGCCACATGGAAAGACGTTCCTCTACTAGCGGCGCACAAGAATCTCGCTTCTCCACAGGAAATCCCCACTGCAATTGCAAGTCACAAAACACCTACAGAAAATCCATCTCCCAGAACCACGAACTTCGATCAGTCTCAACAACAACTAAAGCATTCTGAATCAATGAGATCCTACGACGATGACGAACCTCTCCTCCTTTCTCCTACCTCCGGTGGTGGAAGGATTAACACTATTCCTGAAGCAGATGAAAACGCAGAGGAAGAAGACGATGACAACTGCGAGTTTCAAGGATTTTTCGTCAACACCAAATCTACCTCCTCTACCAAATCCTTCTCCGATGACATACAAACCGGTGATGGAGTCGGAGATTCAAGAACTGTTCAGGTGAAGTTAATGCCGGAATGTGCAGTCGTATCAGTTTCCAGAACACACGAAACATACGCTTTGGTTTTAAAAGTAAAAGCACCACCGCCACTCCGCGGCGGAACCAGCACCTTAGATCCTTCACGGCGTGCTCCGATAGATCTTGTTACCGTTCTCGATGTTGGTGGTTCCATGTCCAGTGCAAAGCTTCACATGCTTAAACGCGCGATGCGTTTGGTTATTTCATCTCTTGGACCTGCTGACAGGCTTTCAATTGTGGCTTTTTCAGCAATCTCCAAACGCCTCTTACCGTTAAGAAGAATGACGGCTCAAGGTCAACGTTTGGCTCGGCGCATCGTTGACCGGCTTGTTACCGGTGAAGGAAACAGCGTTAGTGAAGCTTTGAAGAAAGCTACTAGAGTATTGGAGGATCGTAGAGAAAGAAACCCGGTCGCTAGCGTCATGCTATTATCCGACGGTCAAGATGAGAAGGTTAACAATAGTAAGAATCAAAATCAACGGAAGATGTATAACCACGCTTCTTCAACCCGGTTCGCGCATATTGAAATTCCGGTTCACGCGTTTGGGTTTGGAAGCAAAAGCGGTTATAGTCATGAACCGGGTGAGGATGCGTTTGCAAAATGTGTTGGTGGGCTTTTGAGCGTGGTGGTTCAAGATTTAAGAGTTCAGTTGGGCTTTCAGTCTGATTCGGCCCGGGCCGAGATAAGTGCAATTTATTCCTGTAGTGGAAGGCCCACGCTGTTGAGCTTAGGAGCAGTACGGCTCGGCGATTTATACGCTGAAGAAGAAAGAGAGCTTTTGGTTGAAATGAGAGTTCCAGTTTCAGCTTTGGGGTATGGGACCCACCATGTGATGACGGTAAGGTGTCTATATAAGGACCCCGCAAGTCAAGAGATAGTATACGGCAGAGAACAGGGACTTACGGTGCAACTACCTCAGAATCAATCTCAGAACGTACGTTCATCAGGAACCAGGATAGAACGGTTGAGGAATCTTTTCATAACTACACGAGCCATAGCTGAGTCAAGGAGGCTTCTTGATCATAACAGTGACTTCACAAGTGCTCATCATTTACTTGCTTCGGCTCGTGCACTTTTGATTCAATCTGGCTCGGCTTCGGCTGATCAATATGTGCGTGGTTTGGAAGCTGAACTAGCGGAGCTGCATTGGAGAAGACAGCAAGAACAGGTTCAGGTTGAGGTTCAGCAGCAACAAATAATGATGCAAAGGAGAAGAGGTGGTGAGAGAGAGATGAATTTGGTGGATGAAAATGGTGAGCCACTTACACCTACATCGGCTTGGAGAGCAGCTGAGAAGCTGGCTAAGATGGCTATGGTCAAGAAGTCTTTGAATAAAGTCAGTGACTTACATGGCTTTGAAAATGCTAGGTTTTAA | 2304 | 0.4575 | MGTGWRRAFCTRDPESTISDNKNNNNNNGSPSPSPRSCARLSFLSGGGSSNPSTPRLQQSKSQPVSSPSLRCRTITEAASQITNDSPRFLSSKSSTPRSTKSNSISNPTSPRSPLKLSLFKNSFKFRSSCGICLNSVKTGQGMAIYTAECAHAFHFPCIAAHVRNHATLVCPVCNATWKDVPLLAAHKNLASPQEIPTAIASHKTPTENPSPRTTNFDQSQQQLKHSESMRSYDDDEPLLLSPTSGGGRINTIPEADENAEEEDDDNCEFQGFFVNTKSTSSTKSFSDDIQTGDGVGDSRTVQVKLMPECAVVSVSRTHETYALVLKVKAPPPLRGGTSTLDPSRRAPIDLVTVLDVGGSMSSAKLHMLKRAMRLVISSLGPADRLSIVAFSAISKRLLPLRRMTAQGQRLARRIVDRLVTGEGNSVSEALKKATRVLEDRRERNPVASVMLLSDGQDEKVNNSKNQNQRKMYNHASSTRFAHIEIPVHAFGFGSKSGYSHEPGEDAFAKCVGGLLSVVVQDLRVQLGFQSDSARAEISAIYSCSGRPTLLSLGAVRLGDLYAEEERELLVEMRVPVSALGYGTHHVMTVRCLYKDPASQEIVYGREQGLTVQLPQNQSQNVRSSGTRIERLRNLFITTRAIAESRRLLDHNSDFTSAHHLLASARALLIQSGSASADQYVRGLEAELAELHWRRQQEQVQVEVQQQQIMMQRRRGGEREMNLVDENGEPLTPTSAWRAAEKLAKMAMVKKSLNKVSDLHGFENARF* | 768 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mal2g0609 | 767 | SMART | ring_2 | 130 | 174 | IPR001841 | - | |
| Mal2g0609 | 767 | SMART | VWA_4 | 348 | 535 | IPR002035 | - | |
| Mal2g0609 | 767 | CDD | vWA_C3HC4_type | 349 | 520 | - | - | |
| Mal2g0609 | 767 | SUPERFAMILY | vWA-like | 348 | 523 | IPR036465 | - | |
| Mal2g0609 | 767 | MobiDBLite | consensus disorder prediction | 1 | 70 | - | - | |
| Mal2g0609 | 767 | Pfam | von Willebrand factor type A domain | 350 | 494 | IPR002035 | - | |
| Mal2g0609 | 767 | Pfam | RING-like zinc finger | 130 | 159 | IPR001841 | - | |
| Mal2g0609 | 767 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 121 | 184 | IPR013083 | - | |
| Mal2g0609 | 767 | MobiDBLite | consensus disorder prediction | 83 | 112 | - | - | |
| Mal2g0609 | 767 | CDD | RING-H2 | 130 | 175 | - | - | |
| Mal2g0609 | 767 | PANTHER | CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR | 3 | 767 | - | - | |
| Mal2g0609 | 767 | MobiDBLite | consensus disorder prediction | 202 | 227 | - | - | |
| Mal2g0609 | 767 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE WAV3 | 3 | 767 | - | - | |
| Mal2g0609 | 767 | MobiDBLite | consensus disorder prediction | 202 | 266 | - | - | |
| Mal2g0609 | 767 | MobiDBLite | consensus disorder prediction | 14 | 70 | - | - | |
| Mal2g0609 | 767 | Gene3D | von Willebrand factor, type A domain | 350 | 513 | IPR036465 | - | |
| Mal2g0609 | 767 | ProSiteProfiles | VWFA domain profile. | 350 | 495 | IPR002035 | - | |
| Mal2g0609 | 767 | ProSiteProfiles | Zinc finger RING-type profile. | 130 | 175 | IPR001841 | - | |
| Mal2g0609 | 767 | SUPERFAMILY | RING/U-box | 123 | 180 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mal2g0609 | Mal-Chr2 | 7090925 | 7093339 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mal2g0609 | - | - | lja:Lj3g3v3131860.1 | 1046.96 |
Event-related genes