Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0544 ATGTCAGAACTCATTTGCAACGATGAAAGAAGAGAGAGTTCAGAGGATGATAAGTGGAAAAAAATTGGCAGTCTTAAAAAGAAAGCAATAAATGCATCTTGCAAATTAAGGCATTCTCTTAAGAAGAAAAGAAGCAGCAAAAGTTGTGGCAGTAGGAGCAATTCCCTCTCCATTGAGGATGTTCGACAAGTTGAGGAGCTTCAAGCAGTCGATGCATTTCGACAAACACTTCTATTAGACAACTTGCTTCCTCCAGCACATGATGACTATCATATGTTATTAAGATTCTTGAAAGCAAGGAAGTTTGATATTGAGAAAGCAAAGCTCATGTGGACCAACATGATCCAATGGAGGAAAGACTATGGTACAGATACAATTATAGAGGATTTTGATTTCAAGGAGTTGCAAGAAGTTCAGAAGTACTATCCACATGGTTATCATGGTGTGGATAAGGAGGGAAGACCTGTTTATATTGAGAGGCTAGGGAAAGTTGATCCCAATAGGCTTATGCAAGTAACTACTATGGAAAGATACTTAAGATACCATGTGCAGGGTTTTGAGAGAGCATTTTCTGTCAAGTTTCCAGCTTGCTCTATAGCTGCTAAGAGACACATAGATTCAAGTACTACAATTTTGGATGTTCAAGGCGTGGGTTTCAAAAACTTCACCAAGTCTGCTCGAGAACTCATCATCCAGCTGCAGAAGATTGATAGTGATTACTATCCTGAAACACTTTTTCAAATGTTTATCATCAATGCTGGTCCTGGTTTTAAGCTTCTCTGGAACACAGTGAAAACATTTATTGATCCCAAAACTACTTCAAAGATTCACGTTCTTGGAAACAAGTTCCACAATAAATTACTCGAGATTATCGATGCGAGTGAGCTACCAGAATTTCTAGGCGGTAGTTGCACTTGTGTAGATCATGGTTGCTGCATGACATCTGATAAAGGGCCATGGCAAGACCCAAACATTTTAAAGATGGTTCTTAGTGGTAAAGTGCAATGTTCTAAACAAATCGTAACAATTTCCAACGATGGGGGGAGGGTAATTGAATGTGATAAAACATCTTTTCCAAAGATAAGAAGTGGCTATACATCTACTGGAGAATCAGTATCTGAAGTTGAAGATATTACCTCTCCCAAAGCATGTGGGAATTCTATGAACCCTATACTGACTCATGTCCAAGAAGAGGCAAGATTTGCTGATAAGGTTGGTCATAGCGGCGGTTTTCCTGGGTATGATGAGTGTGTTCCCATGGTTGACAAGACTGTTGATGTTGGACCAAAGGAGAAGCAAGCGGCACCACGAAACTCATTTGGCTCAAAAGAAAATCTGCTTCTGATAACCAGGACTTATACAGTGGGGGTCGTGTTTGCCCTTTTTGCTTTTGTTCGATCAATAGCATTTCGTGTAAAAAGGGAGGAACTGGCTACCGGATTCACAAAGACAAACCCCTCCTCATCTTCTACCTTAAATCGCCTGGGTGAACTTGAAAAAAAAGTTGAGACACTACAGTATAAACTTAATGTGATGCCACGTGAGAAAGAGGAGCTGCTAAATGCTGCAGTTTGTCGTGTGGATGCTTTGGAAGCAGAGCTCATTGCTACGAAGAAGGCTTTGTACGAGGCTTTAATGAAACAAGAAGAACTTTTGGCATATATAGACAGTCAGGAAAAAAGCAAATTCAAGTGCTGCTGGTAA 1704 0.4014 MSELICNDERRESSEDDKWKKIGSLKKKAINASCKLRHSLKKKRSSKSCGSRSNSLSIEDVRQVEELQAVDAFRQTLLLDNLLPPAHDDYHMLLRFLKARKFDIEKAKLMWTNMIQWRKDYGTDTIIEDFDFKELQEVQKYYPHGYHGVDKEGRPVYIERLGKVDPNRLMQVTTMERYLRYHVQGFERAFSVKFPACSIAAKRHIDSSTTILDVQGVGFKNFTKSARELIIQLQKIDSDYYPETLFQMFIINAGPGFKLLWNTVKTFIDPKTTSKIHVLGNKFHNKLLEIIDASELPEFLGGSCTCVDHGCCMTSDKGPWQDPNILKMVLSGKVQCSKQIVTISNDGGRVIECDKTSFPKIRSGYTSTGESVSEVEDITSPKACGNSMNPILTHVQEEARFADKVGHSGGFPGYDECVPMVDKTVDVGPKEKQAAPRNSFGSKENLLLITRTYTVGVVFALFAFVRSIAFRVKREELATGFTKTNPSSSSTLNRLGELEKKVETLQYKLNVMPREKEELLNAAVCRVDALEAELIATKKALYEALMKQEELLAYIDSQEKSKFKCCW* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0544 567 Gene3D - 22 121 - -
Mal2g0544 567 Pfam CRAL/TRIO domain 140 302 IPR001251 -
Mal2g0544 567 SUPERFAMILY CRAL/TRIO domain 134 328 IPR036865 -
Mal2g0544 567 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 479 563 - -
Mal2g0544 567 PANTHER CELLULAR RETINALDEHYDE BINDING/ALPHA-TOCOPHEROL TRANSPORT, CRAL/TRIO-RELATED 479 563 - -
Mal2g0544 567 PANTHER CELLULAR RETINALDEHYDE BINDING/ALPHA-TOCOPHEROL TRANSPORT, CRAL/TRIO-RELATED 8 473 - -
Mal2g0544 567 SUPERFAMILY CRAL/TRIO N-terminal domain 65 130 IPR036273 -
Mal2g0544 567 Pfam CRAL/TRIO, N-terminal domain 90 113 IPR011074 -
Mal2g0544 567 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 134 308 IPR001251 -
Mal2g0544 567 CDD SEC14 135 302 IPR001251 -
Mal2g0544 567 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 8 473 - -
Mal2g0544 567 SMART sec14_4 134 305 IPR001251 -
Mal2g0544 567 PRINTS Cellular retinaldehyde-binding protein signature 92 114 - -
Mal2g0544 567 PRINTS Cellular retinaldehyde-binding protein signature 261 280 - -
Mal2g0544 567 SMART CRAL_TRIO_N_2 89 114 IPR011074 -
Mal2g0544 567 Gene3D - 122 332 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0544 Mal-Chr2 6378241 6382155 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0544 68 299 Acyl Lipid Metabolism Gene Families AT5G47730 28.395 1.09e-19 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0544 - - gmx:100811161 795.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0544 2 6378241 6382155 Mal2g0544 2 6378241 6382155 ECH