Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0536 ATGGGTTCAGTTTGTTGTGTTGCTGCAAAGGATCAAACTATTCCCAATAGAACTGGAAGTGAAAGTTTTCACAGAAATCCCGTGTGTTCACCATCATTGAGTTTTCAATGGGATAGATGGGGCCGTGTCGCTAGTGAAATTGATGATCTTTCGTTTCGCGCTTCTCGCAGAGTCAGCAGAAGTGTCAGCATGGAGTTAAAGGGGTCATTAAGTTCTGATAGAGGAAATTTTTCTGATGTGGGGAGCACCCTGGAGAACTCTGTAACACCCATGTCTCAGAAGTCCCCTATTCATGAGCAATTAGGTGCAAATCGGATGACTCTATCTTCGGATCTATCCATGTCAAGTAATTGTTCTACAGTGGCCAAAAATCTGACAGAATCACCAGAGATCGCAGAATCTTCAATACCAAATATTTCTTTCTCAATACCCTCTTCTTTCTCAACACCTACAACCCGCAATCTTAATCGTCACAATCTTCCTAACTCAACACCATCTAGATGGGCTCATCGATCTCCAGGACACCCACTATTGAGACAAATTTCTGATAGTCGAATCCTGGGTCTGAAATCGCCAGACAACTCTATTTCTGAAGGAAGGCCATCATTTGTACTGTCCACTTGCAGCAATGACATGATAGCTGGATCCCAATGTGGGTCATCTGATGGCTGGTCTATGCGCACCTTTTCTGAACTGGTGGCATCATCTCAAAAGGAAAGGTGGTCATTTGATAGTGAGCATTTTGGTTCAGGTCGCCACAAGATAAGTGGAACTAGTAGTAGGTTCTCGTATTCTCCCTCCATGGATTTACAATCTTGCGGGGCCTGCTCCAAGCTCTTGACTGAGAGAACTGCATGGAGCAGCCAGAAATTTATTTCCAACAATGACCTCTCAGTTGTTGCTGTGCTGGTCTGTGGTCATGCATATCATGCAGAATGTTTGGAAACCATGACATCAGAAGCAGATAGTTATGATCCAGCTTGTCCAATTTGCATGGTTGGAGAGAAGCACTTGTCGATGTTATCAAGAAAAAGTCTTAGGGCCGAATCAGAAATGAAGGCCAAGAACTACAAGATATCCCGAAACCGTGTAGTTGATAGCTACTTTGATGGTGGATTAGATGTTTATGATCGCCAAAAAAATGCAGTTTCAAAATTGGAGGCTAGCTCCAGTTCAAGGAGTTCATTAAGAAAACCCTTCTTGAAGCGACATTTTTCACTGGGATCCAAGTGGAATCGATCCTTGTCTGATAATGATTCTGCCAGGAAGAAGGGTTTTTGGGCACGATATCGTAAAGATTGA 1302 0.4324 MGSVCCVAAKDQTIPNRTGSESFHRNPVCSPSLSFQWDRWGRVASEIDDLSFRASRRVSRSVSMELKGSLSSDRGNFSDVGSTLENSVTPMSQKSPIHEQLGANRMTLSSDLSMSSNCSTVAKNLTESPEIAESSIPNISFSIPSSFSTPTTRNLNRHNLPNSTPSRWAHRSPGHPLLRQISDSRILGLKSPDNSISEGRPSFVLSTCSNDMIAGSQCGSSDGWSMRTFSELVASSQKERWSFDSEHFGSGRHKISGTSSRFSYSPSMDLQSCGACSKLLTERTAWSSQKFISNNDLSVVAVLVCGHAYHAECLETMTSEADSYDPACPICMVGEKHLSMLSRKSLRAESEMKAKNYKISRNRVVDSYFDGGLDVYDRQKNAVSKLEASSSSRSSLRKPFLKRHFSLGSKWNRSLSDNDSARKKGFWARYRKD* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0536 433 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 258 333 IPR013083 -
Mal2g0536 433 MobiDBLite consensus disorder prediction 69 92 - -
Mal2g0536 433 SUPERFAMILY RING/U-box 268 332 - -
Mal2g0536 433 SMART ring_2 273 331 IPR001841 -
Mal2g0536 433 MobiDBLite consensus disorder prediction 150 169 - -
Mal2g0536 433 ProSiteProfiles Zinc finger RING-type profile. 273 331 IPR001841 -
Mal2g0536 433 PANTHER C3HC4-TYPE RING ZINC FINGER PROTEIN 1 427 - -
Mal2g0536 433 MobiDBLite consensus disorder prediction 150 173 - -
Mal2g0536 433 PANTHER EXPRESSED PROTEIN 1 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0536 Mal-Chr2 6269760 6271901 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0536 - - gmx:100793040 666.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0536 2 6269760 6271901 Mal2g0536 2 6269760 6271901 ECH