Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0529 ATGTTGCTTCGGAGATTGCCCTGGATGGCGGTTTCCGCTGCCGCACCACTTCCATTGCATTCTTTTTCCATCAGAGTTTTCACTCCCATTCCAAAGCAACTTACCTTCTCCCCTCTATCCTTCTGCTCCACCTCCGACATTCATCTCACTCAACATCCAGATAAACTTGAACTCGAAATGGATAATCGTCGCTCGCAGCATCTCAAACCCGGTCTTTATCTTGTAGGAACACCCATTGGAAATCTTGAAGATATCACTTTCAGGGCTCTCCGTGTGTTGAACTCTGCAGATGTTATATTATCGGAAGACACGAGGCACTCTGGGAAATTGCTTCATCACTACAATATCAAGACACCCCTTATGAGTTATCACAAATTCAATGAATCACAAAGGGAACAGCTTGTGCTCAGGAGGTTGAAACAAGGTGAGATTGTGGCACTTATAAGTGACGCTGGAACGCCGGGTATAAGTGATCCTGGTATGGAGTTGGCCAAATTATGTGTTAGTGAAAATGTTCCTGTTGTTCCAATCCCTGGGCCATGTGCTTTAGTATCGGCTCTTTCTGCCTCGGGTTTATCCACCGACGAATTTACATTTGTCGGTTTTCTTCCAAAACATTCGGGATCAAGAAGAAAAAGGCTCATGGCTTCGGCAGAGCAAACGGCAACACAAATATTTTACGTTCCTCCTCACAAGCTTTCTCAGTTTCTTGAAGAGGGTTTGTCAATTTTTGGAGATACAAGGAGATGTGTTATTGCTCGAGAAATGACAAAGTTTCACGAAGAGTTTTGGCGCGGCACTTTCGACGAAGCCAGCAAAGAATTTTCTATTCGTCAGCCAAAGGGAGAGCTTACCATATTGATTGAAGGGCAAGCCAATTCTAAAGTTGAACCTCCATCAGACATCGAGCTTGAGAATGAACTAAGAGAACTAATCGAAAACGGCGAGAGTCTTTCCACGGCTGTTAAATTGGTTACTGGAAGAACATCAGTGAGTAGAAAAACTATATATTCACTTGCGTTGCGGAAATTCGGGAAGCAACTTGAAGTGGAAGATGATTCAAGTTAG 1068 0.4373 MLLRRLPWMAVSAAAPLPLHSFSIRVFTPIPKQLTFSPLSFCSTSDIHLTQHPDKLELEMDNRRSQHLKPGLYLVGTPIGNLEDITFRALRVLNSADVILSEDTRHSGKLLHHYNIKTPLMSYHKFNESQREQLVLRRLKQGEIVALISDAGTPGISDPGMELAKLCVSENVPVVPIPGPCALVSALSASGLSTDEFTFVGFLPKHSGSRRKRLMASAEQTATQIFYVPPHKLSQFLEEGLSIFGDTRRCVIAREMTKFHEEFWRGTFDEASKEFSIRQPKGELTILIEGQANSKVEPPSDIELENELRELIENGESLSTAVKLVTGRTSVSRKTIYSLALRKFGKQLEVEDDSS* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0529 355 Pfam Tetrapyrrole (Corrin/Porphyrin) Methylases 72 271 IPR000878 GO:0008168
Mal2g0529 355 Hamap Ribosomal RNA small subunit methyltransferase I [rsmI]. 71 290 IPR008189 GO:0008168
Mal2g0529 355 Gene3D - 179 296 IPR014776 GO:0008168
Mal2g0529 355 ProSitePatterns RsmI AdoMet-dependent methyltransferase protein family signature. 149 160 IPR018063 GO:0008168
Mal2g0529 355 TIGRFAM TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 72 341 IPR008189 GO:0008168
Mal2g0529 355 PANTHER RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE I 54 352 IPR008189 GO:0008168
Mal2g0529 355 CDD RsmI 73 289 IPR008189 GO:0008168
Mal2g0529 355 SUPERFAMILY Tetrapyrrole methylase 70 288 IPR035996 GO:0008168
Mal2g0529 355 Gene3D - 57 178 IPR014777 GO:0008168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0529 K07056 - gmx:100819709 534.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0529 2 6195740 6208926 Mal2g0529 2 6195740 6208926 ECH