Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0519 ATGAAGATTGAAGAAGAAAACGGTTACGGTGGAAGTAGCGGTTCGAACTTGGAGACATCGAAGGCAGAGAGATCGGTGTGGCTTATGAAGTGTCCTGTCGCTGTTGCTAAGTCATGGCAGAATCATCCTCCTTCTCAACCTCTTTCTAAAGTCGTTTTTTCCATTGATCCTCTTCTTCCTGAAGACGATCCTTCTCATCTTCAGTTTACGATGGAGATGGCTGGCACTGAAGCTGTGAATATGCCAAAAACTTATTCTTTGAATATGTTTAAAGACTTCGTTCCTATGTGCATTTTCTCTGAGACAAGCGAAGGTGACAAGGTTGCAATGGAAGGGAAAGTAGAGCATAAGTTTGATATGAAGCCACGTCATGAAAACATGGATGATTATGGAAAATTGTGCCGGGAGAGGACAAAGAAATCTATGATTAAAAATCGACAAGTACAGATTATTACTGATGATCGTGGAACGCACATGAGGCCAATGCCTGGAATGGTTGGCTTAGTTTCATCCAATTTTAAGGATAAGAAGAGGACACAGCCAGTCAAACAAACTGATACGAAGAGAACAAGAAGAGATCGCGGAGAGCTGGAGGATATAATGTTCAAACTATTCGAAAGACAGCCCAACTGGGCCTTGAAGCAACTTGTCCAAGAGACTGATCAACCTGCGCAATTCTTGAAAGAAATCTTGAATGAACTGTGTGTATACAATAAAAGAGGTGCCAATCAAGGAACTTACGAGCTGAAACCTGAATACAAGAAATCTGTTGAAGACGCAAACGCTGAATAA 792 0.4154 MKIEEENGYGGSSGSNLETSKAERSVWLMKCPVAVAKSWQNHPPSQPLSKVVFSIDPLLPEDDPSHLQFTMEMAGTEAVNMPKTYSLNMFKDFVPMCIFSETSEGDKVAMEGKVEHKFDMKPRHENMDDYGKLCRERTKKSMIKNRQVQIITDDRGTHMRPMPGMVGLVSSNFKDKKRTQPVKQTDTKRTRRDRGELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRGANQGTYELKPEYKKSVEDANAE* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0519 263 SUPERFAMILY Rap30/74 interaction domains 15 122 IPR011039 GO:0006367
Mal2g0519 263 SUPERFAMILY "Winged helix" DNA-binding domain 189 255 IPR036390 -
Mal2g0519 263 Gene3D - 189 256 IPR036388 -
Mal2g0519 263 PANTHER GENERAL TRANSCRIPTION FACTOR IIF SUBUNIT 2 11 261 IPR003196 GO:0005674|GO:0006366|GO:0006367
Mal2g0519 263 Pfam TFIIF, beta subunit HTH domain 191 254 IPR040450 -
Mal2g0519 263 CDD TFIIF_beta 16 122 - -
Mal2g0519 263 Pfam TFIIF, beta subunit N-terminus 23 138 IPR040504 -
Mal2g0519 263 PANTHER TRANSCRIPTION INITIATION FACTOR IIF, BETA SUBUNIT 11 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0519 Mal-Chr2 6083200 6088985 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0519 K03139 - gmx:100788473 455.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0519 2 6083200 6088985 Mal2g0519 2 6083200 6088985 ECH