Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0502 ATGAGCAAAAGACCACCACCTGATCCTGTGGCAGTACTACGAGGCCACCGCGCTTCCGTCACCGATATTTCTTTTCATCCCTCCAAGCCTTTATTATTCTCCGGTTCTGCTGATGGTGAACTGCGAATTTGGGATACATTTCGGCGTCAAACTGTTTCATCAGCATGGTTACATAGTGCAGCACATGGGATTGTTGCTCTTGCCAGTAGTTCTTCACTTGGGAGTAATAAATTTGTCAGCCAGGGTAGGGATGGAACTGTGAAAGTTTGGGATTTTGATGATACTGGTTTGTCCAGAATTCCATCACTTACAATCAACACAAACACTTACCATTTTTGTAAGTTTTCCATGGCTAAGAATCAGAGTACTAGGTTAAAAGAAGGGGAAGCATCAAAAGATTGCCTTGAAACAGAAGAGGCTCATACTAATCAAAGTTGTTCTGAAAGCTCTGAAGGTTTTGGGCTACCATATGTGGCTTTGTCGGGGGAGAACTCTTCTGAGGTTGAAATTTGGGATCTCAAGTCAGCTGAAAGATTTGCGCGACTCCCTTCTAACATTGGGCATAACTCGTCAACTTCCAGCAGCAAAGGGATGTGCATGGCACTTCAATTGTTTTTACCGTCTGAATCACGAGGATTTTTGAATGTCATGGCTGGATATGAAGATGGTTCCATGCTTTGGTGGGATGTACGGAATCCCGGAGCTCCAATAAGTTCTGTGAAATTCCATTCCGAGCCAGTTCTGAGCGTCTGTATTGACGAGTCTTGCAAAGGGGGTATATCTGGAGCTGCAGATGAGAGGATTGTGATGTACAGCTTGGATCATTCTTCGGGTACATGTGTGGTGAATAAAGAAATCACATTGGAGCGACCTGGGATCTCAGACACCTCAATTCGGCTTGATGGCAAAATTGCTGCAACTGCTGGCTGGGACCACAGAGTAAGGATATATAATTACCGCAAAGGAAATGCTTTAGCTGTACTTAAGTATCATCATGCCATGTGCAATGCTGTAACTTTTTCGTCTGACTGTAAGCTTATGGCCTCTGCATCGGCTGACACAACTGTGGCGCTATGGGAATTGTATCCTCCAAGAACATGA 1101 0.445 MSKRPPPDPVAVLRGHRASVTDISFHPSKPLLFSGSADGELRIWDTFRRQTVSSAWLHSAAHGIVALASSSSLGSNKFVSQGRDGTVKVWDFDDTGLSRIPSLTINTNTYHFCKFSMAKNQSTRLKEGEASKDCLETEEAHTNQSCSESSEGFGLPYVALSGENSSEVEIWDLKSAERFARLPSNIGHNSSTSSSKGMCMALQLFLPSESRGFLNVMAGYEDGSMLWWDVRNPGAPISSVKFHSEPVLSVCIDESCKGGISGAADERIVMYSLDHSSGTCVVNKEITLERPGISDTSIRLDGKIAATAGWDHRVRIYNYRKGNALAVLKYHHAMCNAVTFSSDCKLMASASADTTVALWELYPPRT* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0502 366 ProSitePatterns Trp-Asp (WD) repeats signature. 347 361 IPR019775 -
Mal2g0502 366 SUPERFAMILY WD40 repeat-like 5 363 IPR036322 GO:0005515
Mal2g0502 366 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 328 366 - -
Mal2g0502 366 ProSiteProfiles Trp-Asp (WD) repeats profile. 13 54 IPR001680 GO:0005515
Mal2g0502 366 SMART WD40_4 6 45 IPR001680 GO:0005515
Mal2g0502 366 SMART WD40_4 279 318 IPR001680 GO:0005515
Mal2g0502 366 SMART WD40_4 50 91 IPR001680 GO:0005515
Mal2g0502 366 SMART WD40_4 233 272 IPR001680 GO:0005515
Mal2g0502 366 SMART WD40_4 321 360 IPR001680 GO:0005515
Mal2g0502 366 ProSiteProfiles Trp-Asp (WD) repeats profile. 328 366 IPR001680 GO:0005515
Mal2g0502 366 PANTHER - 3 366 - -
Mal2g0502 366 PANTHER TRANSDUCIN BETA-LIKE 3 3 366 - -
Mal2g0502 366 Pfam WD domain, G-beta repeat 326 359 IPR001680 GO:0005515
Mal2g0502 366 Pfam WD domain, G-beta repeat 9 45 IPR001680 GO:0005515
Mal2g0502 366 Gene3D - 6 203 IPR015943 GO:0005515
Mal2g0502 366 Gene3D - 207 366 IPR015943 GO:0005515
Mal2g0502 366 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 13 45 - -
Mal2g0502 366 PRINTS G protein beta WD-40 repeat signature 78 92 IPR020472 -
Mal2g0502 366 PRINTS G protein beta WD-40 repeat signature 347 361 IPR020472 -
Mal2g0502 366 PRINTS G protein beta WD-40 repeat signature 32 46 IPR020472 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0502 10 92 Miscellaneous Gene Families AT5G08390 31.325 4.63e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0502 K24770 - gmx:100800482 593.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0502 2 5855584 5861290 Mal2g0502 2 5855584 5861290 ECH