Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0435 ATGGCATTCATCAAATCAAGAGTAAACTTCCACTTACACCACTCTCTTTTACCACACACTTTCAGACTATGTTCTTCTTCTTCACCTGTTGTTTCAGAATCTCATCACATTCAAAACGAATCAAACCAACACGACGATGTTCCTCAAAAAACCAATCTATCTCCCGAAGACACTCACATAGTCGATAAATTTCACACCATCATTAAAGACCATTACCGCAAAAACCCTAACCCTAACGCCGTTTCACCTTCACTTAATCTCTCAATACCCGATCTTTCAATCGATTTTTCCAAAATCTCCACCGTCCATTCAATTTCCCCCTCCATCACCCGCCGTGTGATTGAGAAATGCGGTGGTGTCCGCCACGGTATTCCATTTCTCCAATCCCTAGCTTTCTTCAACTGGGCCACCGCACTAGAAGGCTTCCCTTCATCCCCTGAGCCTTACAATGAGATGATTGACCTCGCCGGGAAACTCAGGCATTTCGATTTAGCTTGGCATTTGATCGATTTGATGAAATCACGCGGTGTTAAAATAACGGTCAGCACGTTCTCTGTTCTCGTCCGGAGATATGTGAGGGCTGGATTGGCTGCGGAGGCGGTGCACTCTTTTAACCGTATGGAAGACTATGGTTGTAAGCCTGATAAGGTTTCATTTTCAATTGTGATTAGTAGTTTATGTAAGAAGAGAAGGGCTAGTGAAGCACAATTGTTTTTTGATAGTCTTAAGCATAAATTTGAACCTGATGTTATAGTTTATACTAGTTTAGTTCATGGTTGGTGTCGTGCTGGTGACATATCCAAAGCTGAAGAGGTTTTTAGTGATATGAAGGTGGCTGGTGTAAAGCCTAATGTTTATACTTATAGCATTGTGATTGATTCGCTTTGTCGGTGTGGACAAATTACTCGTGCTCATGATGTTTTCGCTGAGATGATAGATGCTGGTTGTGATCCTAATGCGGTTACTTTTAATAGTCTTATGAGGGTTCATGTGAAAGCTGGAAGGACTGAAAAGGTTTTGCAGGTATATAATCAAATGAAGAGGCTTGGTTGTGCTGCTGATACGATTAGCTATAATTTCTTAATTGAGAGTCATTGTAAGGATGAGAATCTGGATGAAGCTGTGAAGGTTCTTGATACAATGGTTAAGAAAGGGGTTGCTCCTAATGCATCTACTTTCAATTCAATTTTTGGATGCATAGCTGAGTTGCACGATGTGAATGGTGCGCATCGGATGTATGCTAAAATGAAGGAACTGAAGTGCATGCCTAATACGTTGACTTATAATATACTGATGAGAATGTTTGCTGACTCGAAATCTATTGATATGGTTCTGAAGTTGAAAAAGGAAATGGATGAGAGTGAAGTTGAACCTAATGTCAATACTTATCGGATTTTGATTTTGATGTTTTGTGAAAAGGGGCACTGGAATAATGCATACAACTTAATGAGGGAGATGGTTGAAGAAAAATGCCTAAAGCCAAATCTATCAATTTATGAAACGGTTTTGGAGCTGCTGAGGAAAGCTGGACAGCTAAAAAAGCATGAAGAGTTGGTCGATAAGATGGTTGCCAGAGGATTCGTCTCTCCTCGTCCTTTGTAG 1602 0.4064 MAFIKSRVNFHLHHSLLPHTFRLCSSSSPVVSESHHIQNESNQHDDVPQKTNLSPEDTHIVDKFHTIIKDHYRKNPNPNAVSPSLNLSIPDLSIDFSKISTVHSISPSITRRVIEKCGGVRHGIPFLQSLAFFNWATALEGFPSSPEPYNEMIDLAGKLRHFDLAWHLIDLMKSRGVKITVSTFSVLVRRYVRAGLAAEAVHSFNRMEDYGCKPDKVSFSIVISSLCKKRRASEAQLFFDSLKHKFEPDVIVYTSLVHGWCRAGDISKAEEVFSDMKVAGVKPNVYTYSIVIDSLCRCGQITRAHDVFAEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIESHCKDENLDEAVKVLDTMVKKGVAPNASTFNSIFGCIAELHDVNGAHRMYAKMKELKCMPNTLTYNILMRMFADSKSIDMVLKLKKEMDESEVEPNVNTYRILILMFCEKGHWNNAYNLMREMVEEKCLKPNLSIYETVLELLRKAGQLKKHEELVDKMVARGFVSPRPL* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0435 533 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 389 423 IPR002885 -
Mal2g0435 533 Gene3D Tetratricopeptide repeat domain 336 451 IPR011990 GO:0005515
Mal2g0435 533 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 11 529 - -
Mal2g0435 533 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 459 493 IPR002885 -
Mal2g0435 533 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 180 214 IPR002885 -
Mal2g0435 533 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 495 529 IPR002885 -
Mal2g0435 533 Pfam PPR repeat family 248 297 IPR002885 -
Mal2g0435 533 Pfam PPR repeat family 423 471 IPR002885 -
Mal2g0435 533 Pfam PPR repeat family 354 398 IPR002885 -
Mal2g0435 533 Pfam PPR repeat family 189 228 IPR002885 -
Mal2g0435 533 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 249 283 IPR002885 -
Mal2g0435 533 TIGRFAM PPR: pentatricopeptide repeat domain 251 285 IPR002885 -
Mal2g0435 533 TIGRFAM PPR: pentatricopeptide repeat domain 392 425 IPR002885 -
Mal2g0435 533 TIGRFAM PPR: pentatricopeptide repeat domain 321 354 IPR002885 -
Mal2g0435 533 TIGRFAM PPR: pentatricopeptide repeat domain 149 180 IPR002885 -
Mal2g0435 533 TIGRFAM PPR: pentatricopeptide repeat domain 462 495 IPR002885 -
Mal2g0435 533 TIGRFAM PPR: pentatricopeptide repeat domain 286 320 IPR002885 -
Mal2g0435 533 TIGRFAM PPR: pentatricopeptide repeat domain 356 390 IPR002885 -
Mal2g0435 533 TIGRFAM PPR: pentatricopeptide repeat domain 427 460 IPR002885 -
Mal2g0435 533 TIGRFAM PPR: pentatricopeptide repeat domain 183 215 IPR002885 -
Mal2g0435 533 Gene3D Tetratricopeptide repeat domain 452 525 IPR011990 GO:0005515
Mal2g0435 533 PANTHER CHLOROPLAST RNA PROCESSING 1-LIKE PROTEIN 11 529 - -
Mal2g0435 533 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 424 458 IPR002885 -
Mal2g0435 533 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 319 353 IPR002885 -
Mal2g0435 533 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 145 179 IPR002885 -
Mal2g0435 533 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 354 388 IPR002885 -
Mal2g0435 533 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 284 318 IPR002885 -
Mal2g0435 533 SUPERFAMILY TPR-like 219 488 IPR011990 GO:0005515
Mal2g0435 533 MobiDBLite consensus disorder prediction 32 54 - -
Mal2g0435 533 Gene3D Tetratricopeptide repeat domain 232 335 IPR011990 GO:0005515
Mal2g0435 533 Gene3D Tetratricopeptide repeat domain 112 231 IPR011990 GO:0005515
Mal2g0435 533 Pfam PPR repeat 149 177 IPR002885 -
Mal2g0435 533 Pfam PPR repeat 321 351 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0435 Mal-Chr2 4854493 4856094 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0435 136 530 Glycosyltransferase AT1G05670 29.208 3.00e-55 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0435 - - gmx:100800850 860.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0435 2 4854493 4856094 Mal2g0435 2 4854493 4856094 ECH