Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0429 ATGCCTACACTAGCAGCCGAAGAATCCCAAGTTACCAACTTGAAGCCCATTCTTGGTGCTTCAGGAGTGAAAGGCAAGAAAGTGACAACTTTGTCCTCAGAAATTACTATTTCTGATTTCATTCAATCTGTTATTAAATCCAAACCAACTGAAAATGACTCACCATTTAGTGTCTTTGACTTAAGGGTAGTAATTGACCTCATGAACAAATGGACCACAAAACTTCCAACCGTTAAGCCTTTTTACGCCGTCAAGTGTAACCCAAACATTTCACTTATAGGCACACTAGCTTCACTTGGCTCCAATTTTGACTGCGCCAGCCGCGCCGAAATTGAATCCGTTTTATCCCTCGGTGTTTCGCCCGACAGAATCATTTACGCCAATCCGTGCAAATCGGAGTCACACATTAAATACGCCGCAAGTGTCGGGGTAAATGTGACAACCTTCGACTCCGTTGGAGAAGTCGAAAAGATCAAAAAATGGCACCCGAAATGCGAGCTCCTCCTCCGTATTAAACCGGAGGAAGACAGTGGAGCGCGATCGTGTTTGGGGCTCAAATACGGTGCGCTTTTTAACGAAGTTCCCGAGCTTCTCAAAGCTGCTGACGTGGCTGGTCTTAAAGTAACTGGCGTGTCTTTCCACATAGGCAGTGGAGGAGCCGACACAAAAGCTTACCATGGAGCCATTTTATTGGCTAAAAATGTTTTTGAAACAGCTTCACAGCTTGGAATGCCAAAACTGAAAATTCTTGATATTGGTGGTGGATTCACTTCTGGCTCAAAGTTTGATGAAGCTGCATTGAACGTGAACGATGCAATAGAAACTCATTTTGGAAATTACGAGGATCTTGTTGTTATTGGTGAACCTGGTCGTTACTTTGCGGAAACGGCGTTTACATTAGCAACAAAAATTATTGGTAAACGTGTGAGAGGTGAAATGAAAGAGTATTGGATCGATGATGGAATTTATGGAACTCTTAATAACATTGTGTTTGATTATGCTATTGTCACATGCACGCCACTTAGGTTTGGTTCAAAACCTGAGAATGTTACATGGAGAGATCCTAAAACTTATGCTTCAACGGTGTTTGGACCCACTTGTGATTCAGTTGATACGGTTCTTAAAGATTATGAGTTACCTGAACTTGAGGTGAACGATTGGCTTGTATTTCCAAAGATGGGTGCTTATACAACTTCCTCTGGAACCAATTTCAATGGGTTTAGCTCCTCAGCTAAACATATTTACCTTGCATGTTCAAGTCCAAGTCTTGTCGGGCGATAA 1281 0.4239 MPTLAAEESQVTNLKPILGASGVKGKKVTTLSSEITISDFIQSVIKSKPTENDSPFSVFDLRVVIDLMNKWTTKLPTVKPFYAVKCNPNISLIGTLASLGSNFDCASRAEIESVLSLGVSPDRIIYANPCKSESHIKYAASVGVNVTTFDSVGEVEKIKKWHPKCELLLRIKPEEDSGARSCLGLKYGALFNEVPELLKAADVAGLKVTGVSFHIGSGGADTKAYHGAILLAKNVFETASQLGMPKLKILDIGGGFTSGSKFDEAALNVNDAIETHFGNYEDLVVIGEPGRYFAETAFTLATKIIGKRVRGEMKEYWIDDGIYGTLNNIVFDYAIVTCTPLRFGSKPENVTWRDPKTYASTVFGPTCDSVDTVLKDYELPELEVNDWLVFPKMGAYTTSSGTNFNGFSSSAKHIYLACSSPSLVGR* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0429 426 Pfam Pyridoxal-dependent decarboxylase, C-terminal sheet domain 295 394 IPR022643 GO:0003824
Mal2g0429 426 PRINTS Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 82 100 IPR000183 GO:0003824
Mal2g0429 426 PRINTS Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 102 114 IPR000183 GO:0003824
Mal2g0429 426 PRINTS Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 285 304 IPR000183 GO:0003824
Mal2g0429 426 PRINTS Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 205 218 IPR000183 GO:0003824
Mal2g0429 426 PRINTS Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 394 407 IPR000183 GO:0003824
Mal2g0429 426 SUPERFAMILY PLP-binding barrel 60 295 IPR029066 -
Mal2g0429 426 SUPERFAMILY Alanine racemase C-terminal domain-like 277 412 IPR009006 GO:0003824
Mal2g0429 426 PRINTS Ornithine decarboxylase signature 320 333 IPR002433 GO:0006596
Mal2g0429 426 PRINTS Ornithine decarboxylase signature 124 148 IPR002433 GO:0006596
Mal2g0429 426 PRINTS Ornithine decarboxylase signature 154 176 IPR002433 GO:0006596
Mal2g0429 426 PRINTS Ornithine decarboxylase signature 54 78 IPR002433 GO:0006596
Mal2g0429 426 PRINTS Ornithine decarboxylase signature 361 371 IPR002433 GO:0006596
Mal2g0429 426 PRINTS Ornithine decarboxylase signature 381 394 IPR002433 GO:0006596
Mal2g0429 426 PRINTS Ornithine decarboxylase signature 80 107 IPR002433 GO:0006596
Mal2g0429 426 PANTHER ORNITHINE DECARBOXYLASE-LIKE 20 420 - -
Mal2g0429 426 ProSitePatterns Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 82 100 IPR022653 -
Mal2g0429 426 Gene3D Lyase, Ornithine Decarboxylase; Chain A, domain 1 51 414 IPR009006 GO:0003824
Mal2g0429 426 Pfam Pyridoxal-dependent decarboxylase, pyridoxal binding domain 64 294 IPR022644 GO:0003824
Mal2g0429 426 CDD PLPDE_III_ODC 53 415 - -
Mal2g0429 426 ProSitePatterns Orn/DAP/Arg decarboxylases family 2 signature 2. 240 257 IPR022657 -
Mal2g0429 426 Gene3D Alanine racemase 64 293 IPR029066 -
Mal2g0429 426 PANTHER ARGININE/DIAMINOPIMELATE/ORNITHINE DECARBOXYLASE 20 420 IPR002433 GO:0006596
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0429 Mal-Chr2 4762671 4763951 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0429 K01581 - gmx:548088 625.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0429 2 4762671 4763951 Mal2g0429 2 4762671 4763951 ECH