Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0341 ATGGCGACCTCAATCCCAGACAGACCCGTCGAGCCTCCGTCTTCCGCCGCCACTGAACCACCTCAAATTCAAACTCAACCTCGGACTCCTACTCCACCTCCGGCTAACCCACCACCACTTCCGCCGCCGGTGAAACCAGAAATCCCATTACCAGACCCCAAAACCTCTAGCGAAGCCAGCTTAATCCTAGTCCCAAGTCACTCACGATGGTTCTCATGGGACTCCATTCACGAATGCGAAATCCGCAACATTCCCGATTCTTCCAAGAACCCTAGGGTTTACAAATACTACAGAAACTCCATCGTTAAATACTTCAGATTCAATCCCAACAGAAAAATCACCTTCACTGATGTTCGCAAAACCCTAGTCGGCGATGTAGGTTCAATTCGAAGAGTCTTCGATTTCCTTGAAGCTTGGGGTTTAATCAATTATCATCCTTCTTCGCTCAGTAAACCCTTCAAATGGGAAGATAAAGACACCAAAACCGACGCAGCGTCCAATTCTACTGAATCTCCTTCTCCGGTGCCTGTCAAAGAAGCTAAGAGATTCTGCAGTAACTGCAAAAATCTTTGTGTCATGGCTTGCTTTGCCTGTGATAAGAATGGTATGACTTTGTGTGCGAGGTGTTTTATTCGGGGAAACTATCGAATTGGTATGAGTAATACAGAATTCAAGAGAGTGGAGATAAGTGAGGAGACGAAAAATGAATGGACTGAGAAGGAAACACTGAATCTTCTTGAAGCTATTACAAATTTCGGTGATGATTGGAAGAGGGTTGCTCATCAAGTTGTTGGTAGGACTGAGAAGGAATGTGTTGCTCGTTTTCTAGAGCTTCCTTTTGGTGATCAATTCCTGCATTATCAACACTCTGAGTCTGCTCCCCTCATTGACAACGGTTCTGATCAGTTGAATCCCCCTGCTAATGCTGAATGTGAAGCCGAAACTGTTGCGTTGGATAAATCTAGTAAGAAAACGCGTCTCACACCTCTTGCGGATGCTAGCAATCCTATCATGGCTCAGGCTGCTTTCCTCTCTGCTTTGGCAGGGACAGAGGTTTCACAGGCTGCGGCTCAAGCTGCTCTGACAAGTTTGTCCGATGTTTACAAATCAACCAGAATTAATTATCGGTCATTTCCAAGGAATATATTGCAGCAAGATGCTGGTGTTGCATCCAATGGTGGTAATGCTTCAGATTCTATCCAAGGATCTCTATTGCGTGCAAATTTACAGCTCGAGAAGGAAGAATCGGATGCGGAAAAAGCAATTTCTGAGATTATAGAAGTTCAGATGAAAAATATCCAGGACAAGCTTATCAACTTTGAAGATGTAGACGTGCTAATGGAAAAAGAACGCCAGCAGTTGGAGCAAATGAAGAGTTTGTTTTTCCTTGATCAGCTTAATCTTTTATTTCGTAAAACATCTCAACCAACGACTGGAGAAGGCAATCATGTAAAAAGGAATTGA 1464 0.4399 MATSIPDRPVEPPSSAATEPPQIQTQPRTPTPPPANPPPLPPPVKPEIPLPDPKTSSEASLILVPSHSRWFSWDSIHECEIRNIPDSSKNPRVYKYYRNSIVKYFRFNPNRKITFTDVRKTLVGDVGSIRRVFDFLEAWGLINYHPSSLSKPFKWEDKDTKTDAASNSTESPSPVPVKEAKRFCSNCKNLCVMACFACDKNGMTLCARCFIRGNYRIGMSNTEFKRVEISEETKNEWTEKETLNLLEAITNFGDDWKRVAHQVVGRTEKECVARFLELPFGDQFLHYQHSESAPLIDNGSDQLNPPANAECEAETVALDKSSKKTRLTPLADASNPIMAQAAFLSALAGTEVSQAAAQAALTSLSDVYKSTRINYRSFPRNILQQDAGVASNGGNASDSIQGSLLRANLQLEKEESDAEKAISEIIEVQMKNIQDKLINFEDVDVLMEKERQQLEQMKSLFFLDQLNLLFRKTSQPTTGEGNHVKRN* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0341 487 CDD SANT 236 278 IPR001005 -
Mal2g0341 487 Pfam SWIRM domain 65 144 IPR007526 GO:0005515
Mal2g0341 487 Gene3D - 68 148 IPR036388 -
Mal2g0341 487 MobiDBLite consensus disorder prediction 1 57 - -
Mal2g0341 487 Gene3D - 232 282 - -
Mal2g0341 487 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 237 271 IPR017930 -
Mal2g0341 487 SMART sant 233 281 IPR001005 -
Mal2g0341 487 ProSiteProfiles SANT domain profile. 232 283 IPR017884 -
Mal2g0341 487 PANTHER SWI/SNF COMPLEX SUBUNIT SWI3B 1 481 - -
Mal2g0341 487 Pfam Myb-like DNA-binding domain 234 277 IPR001005 -
Mal2g0341 487 SUPERFAMILY Homeodomain-like 58 158 IPR009057 -
Mal2g0341 487 ProSiteProfiles SWIRM domain profile. 62 153 IPR007526 GO:0005515
Mal2g0341 487 PANTHER SWI/SNF COMPLEX-RELATED 1 481 - -
Mal2g0341 487 SUPERFAMILY Homeodomain-like 233 284 IPR009057 -
Mal2g0341 487 Coils Coil 404 431 - -
Mal2g0341 487 MobiDBLite consensus disorder prediction 25 50 - -
Mal2g0341 487 Pfam SWIRM-associated region 1 406 468 IPR032451 -
Mal2g0341 487 ProSiteProfiles Myb-like domain profile. 229 279 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0341 Mal-Chr2 3806277 3808664 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0341 K11649 - gmx:100779777 626.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0341 2 3806277 3808664 Mal2g0341 2 3806277 3808664 ECH