Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0236 ATGGGTTTCTTCAGTACTATATTCGGATTTTTTGGATTTGGAATTGGGATCTCCATTGGTCTGATTACTGGATATTTTCTCTTCATTTACTCTCAACCCACTAGTGTTAAGGATCCTGAAATCAAGCCATTGGCGGAGGAAGATTCGAAAGCTTTGCAACGAATAATACATGAGATTCCACTTTGGATAAAAAATCCGGACTTTGATCGGGTTGATTGGCTAAACAAGCTCATAGAGTATATGTGGCCGTACCTTGATAAGGCAATATGCAAGACTGCAAAAGATATTGTAAAACCCATAATTGCTGAGCAAATCCCTAAATATAAAATTGATTCTGTTGAGTTTGAAGTGCTCACATTGGGATCCCTTCCACCAACATTTCAAGGAATGAAAGTTTACATGACCGAAGAGAAGGAGATAATTATGGAGCCCTACATAAAATGGGCTGGAAATCCTAATGTCATTATTGCAGTTAAGACATTTGGGTTGAAAGCAACTATTCAGGTGATAGATTTGCAAGTCTTTCTTGCACCTCGCGTTACTCTGAAGCCTCTGGTTCCAAGTTTTCCTTGCTTTGCCAACATTTATGTGTCTCTCATGGAAAAGCCACACCTTGACTTTGGACTAAAGCTTATAGGAGCCGATCTTATGTCTATTCCTGGACTGTACATGTTTGTTCAGGAGTTTATCAAAGATCAGGTTGAAAATATGTATCTATGGCCCAAAACTTTGGAAGTTCAAATTTTAGATCCAACAAAAGCTTTTAGAAGGCCTGTTGGAATGTTAAATGTAAATGTTGTAAAAGCAACTAAGTTAAAGAAGAAAGATCTTCTTGGCGCATCTGACCCTTATGTGAAACTAAAGCTTACCGGGGATAAACTGCCATCAAAAAAGACAACTGTGAAGCACAAAAACTTGAACCCAGAATGGAATGAGGAATTTAATTTGGTTGTTAAAGATCCAGAGTCTCAATCTTTGGACATTCATGTTTATGACTGGGAACAGGTTGGGAAGCATGACAAGATGGGTATGAATGTAATCCAATTGAAAGAACTCACCCCTGAAGATCCTAAAGTTTTCACTCTTGAGCTTTTGAAAAATATGGATCCAAGTGATGCCCAAAATGATAAGTCTCGTGGACAGATTGTTTTAGAACTAACATATAAACCCTTCAAAGAGGATGAATTGGACAAAGGTGGCTTTGATAGGATACAATCCCTTCAAAAAGCACTTGAAGGCACTCCTCCAGGTGGAGGTCTCCTTGTAATTGTAGTCCATGAAGCTCAAGATATTGAAGGAAAATATCACACCAATCCACATGTGCGTCTTATTTTCAAAGGGGAAGAGAGAAAAACTAAGAGCATGAAAAAGAATAGAGATCCAAGGTGGGAAGAGGAGTTTCAATTTATGGTGGAGGAACCTCCAACTAATGATAAATTACACGTGGAAGTCATCAGCACTTCATCACGGAATTTGTTGCGTCAAAAGGAATCATTAGGTTACGCTGACATCGCTCTTGCAGACGTTGTTGCTAACAAGAGAATCAATGAGAGGTACCATCTCATAGACTCCAAAAATGGTCGTATTCAAATAGAGATACAATGGAGAGCTTCACAAGCTAATTGA 1626 0.3862 MGFFSTIFGFFGFGIGISIGLITGYFLFIYSQPTSVKDPEIKPLAEEDSKALQRIIHEIPLWIKNPDFDRVDWLNKLIEYMWPYLDKAICKTAKDIVKPIIAEQIPKYKIDSVEFEVLTLGSLPPTFQGMKVYMTEEKEIIMEPYIKWAGNPNVIIAVKTFGLKATIQVIDLQVFLAPRVTLKPLVPSFPCFANIYVSLMEKPHLDFGLKLIGADLMSIPGLYMFVQEFIKDQVENMYLWPKTLEVQILDPTKAFRRPVGMLNVNVVKATKLKKKDLLGASDPYVKLKLTGDKLPSKKTTVKHKNLNPEWNEEFNLVVKDPESQSLDIHVYDWEQVGKHDKMGMNVIQLKELTPEDPKVFTLELLKNMDPSDAQNDKSRGQIVLELTYKPFKEDELDKGGFDRIQSLQKALEGTPPGGGLLVIVVHEAQDIEGKYHTNPHVRLIFKGEERKTKSMKKNRDPRWEEEFQFMVEEPPTNDKLHVEVISTSSRNLLRQKESLGYADIALADVVANKRINERYHLIDSKNGRIQIEIQWRASQAN* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0236 541 SMART C2_3c 420 518 IPR000008 -
Mal2g0236 541 SMART C2_3c 261 361 IPR000008 -
Mal2g0236 541 ProSiteProfiles C2 domain profile. 240 362 IPR000008 -
Mal2g0236 541 Pfam C2 domain 261 358 IPR000008 -
Mal2g0236 541 Pfam C2 domain 420 521 IPR000008 -
Mal2g0236 541 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 419 536 IPR035892 -
Mal2g0236 541 Pfam Synaptotagmin-like mitochondrial-lipid-binding domain 67 247 IPR039010 -
Mal2g0236 541 ProSiteProfiles C2 domain profile. 403 519 IPR000008 -
Mal2g0236 541 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 67 249 IPR031468 GO:0008289
Mal2g0236 541 PRINTS C2 domain signature 304 317 IPR000008 -
Mal2g0236 541 PRINTS C2 domain signature 326 334 IPR000008 -
Mal2g0236 541 PRINTS C2 domain signature 277 289 IPR000008 -
Mal2g0236 541 CDD C2 262 355 - -
Mal2g0236 541 Gene3D C2 domain 420 538 IPR035892 -
Mal2g0236 541 Gene3D C2 domain 256 405 IPR035892 -
Mal2g0236 541 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN-RELATED 1 537 - -
Mal2g0236 541 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 257 392 IPR035892 -
Mal2g0236 541 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 1 537 IPR045050 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0236 Mal-Chr2 2868635 2873282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0236 262 474 Lipid Metabolism Gene Families AT1G51570 28.814 5.97e-14 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0236 - - cam:101497090 946.036