Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0228 ATGCCACCAGCTTTTGATCCCAATTCTAATAATGTCTATGCCACCACTAAGTATAACAACAATCAACCTCTAACACTACCTGTTGTGTTTCAACAACAGAGGGATGAGCTTAATCAATTTATCACATCACAGCAACAACTGGGGACATTATTAAAGAAGGTAGAATCGGATATGTTTCATATACTAAGTCAAAAGGATGAACAAATATCACAAGCGGCAAAGAAAAGGATTGAGTTGGAACAATTTTTGACAAGACTAGAGACAGAGAATCAATCGTTGCGGAGAGCTGCACATGAAAATGAAGCTATGGTTTTGTCGCTCAACAATGCCTTAGAAAAGATCAAAGAAAGAGCATTGGCAGTAGAAGAAGATGTAGAGTCATGCTGTGACATGAAAAACAACAACATGATGATTTGCAAATGCTGTCATTCACGGGAGTCGTCTTTTATGTTTCTTCCTTGCAGACACCTTTGTTCGTGTAAAGCGTGTGAGCCTTCTCTCCAAGCATGTCCTGTGTGCCTAATGCCAAAAAGATCTATTATAGAGACTCTCATTTTCTAG 561 0.3886 MPPAFDPNSNNVYATTKYNNNQPLTLPVVFQQQRDELNQFITSQQQLGTLLKKVESDMFHILSQKDEQISQAAKKRIELEQFLTRLETENQSLRRAAHENEAMVLSLNNALEKIKERALAVEEDVESCCDMKNNNMMICKCCHSRESSFMFLPCRHLCSCKACEPSLQACPVCLMPKRSIIETLIF* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0228 186 Coils Coil 76 124 - -
Mal2g0228 186 Gene3D - 148 174 - -
Mal2g0228 186 Gene3D Death Domain, Fas 44 147 IPR011029 -
Mal2g0228 186 Pfam Zinc finger, C3HC4 type (RING finger) 138 178 - -
Mal2g0228 186 ProSiteProfiles Zinc finger RING-type profile. 139 173 IPR001841 -
Mal2g0228 186 PIRSF SBP1_RNase_bind 19 186 IPR017066 -
Mal2g0228 186 PANTHER BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 2-RELATED 20 185 - -
Mal2g0228 186 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 20 185 IPR017066 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0228 Mal-Chr2 2782067 2782713 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0228 101 173 Miscellaneous Gene Families AT4G39050 30.137 5.75e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0228 K19042 - gmx:100776899 187.963