Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0208 ATGGAAAGGAAGAGGAGCGTGCGTATGTGCTGTTTATGCAATGAAAGAAGAGCTTCTCTCAAGAGACCCAAAACCCTTCAACAGATTTGCAGAGAATGCTTCTATCTTGCTTTCGAAAACGAGATTCACCAACTCATCGTTTCCAACCGCCTCTTCACCCGCGGCGACCGCGTTGCCATCGGCGCTTCCGGCGGTAAAGACTCCACCGTCCTCGCCTACGTTCTATCCAAACTCAACCGCGTCCACGATTACGGCCTCCATCTCTTCCTCCTCTCCGTCGACGAGGGTATCACCGGCTACCGCGACGATTCTCTCCAAACAGTTCAAAGAAACCAGATTCAGTACGGGTTACCCCTCAAAATCGTATCCTACAAGGATCTGTACGGATGGACGATGGACGAGATCGTGAAACTGATCGGTCTGAAGAACAATTGCACTTTCTGCGGCGTGTTCCGTCGGCAGGCACTGGATCGAGGCGCGGCTTTCCTGAAAGCAGATAAAGTGGTGACAGGACACAATGCAGACGACATAGCGGAGACGGTGCTGTTGAACATATTGAGAGGAGATATAGCTAGATTGAGTAGATGCAGTTCAATAGTAACAGGTGAAGATGGACCCATCCCTAGATGCAAACCTTTCAAGTATACTTACGAAAAGGAGATTGTTATGTATGCTTATTTCAAGAAGCTTGACTACTTTTCCACTGAATGCATTTATTCTCCAAATGCATATCGTGGTTTTGCTCGTGAGTTCATTAAGGATTTAGAGAGAATCAGGATTTCTACCACTACCAAAATGCCTGACCAGGGAACTTGTCAACGCTGTGGTTATATTTCTAGTCAGAAATGGTGTAAAGCTTGTGTTCTGCTTGATGGATTGAATCGAGGTTTGCCTAAATTGGGAATTGGGCGGAGTCGGGTTGCCATTGGTTGCAAGGAAGAAAATGAAAGCCATGGAACAAAGAGCATTGAGAGCAAACGATGTGAATCGTTAGACTTCTGA 1002 0.4671 MERKRSVRMCCLCNERRASLKRPKTLQQICRECFYLAFENEIHQLIVSNRLFTRGDRVAIGASGGKDSTVLAYVLSKLNRVHDYGLHLFLLSVDEGITGYRDDSLQTVQRNQIQYGLPLKIVSYKDLYGWTMDEIVKLIGLKNNCTFCGVFRRQALDRGAAFLKADKVVTGHNADDIAETVLLNILRGDIARLSRCSSIVTGEDGPIPRCKPFKYTYEKEIVMYAYFKKLDYFSTECIYSPNAYRGFAREFIKDLERIRISTTTKMPDQGTCQRCGYISSQKWCKACVLLDGLNRGLPKLGIGRSRVAIGCKEENESHGTKSIESKRCESLDF* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0208 333 CDD Alpha_ANH_like_II 57 243 - -
Mal2g0208 333 Gene3D HUPs 9 317 IPR014729 -
Mal2g0208 333 Pfam PP-loop family 58 245 IPR011063 -
Mal2g0208 333 PANTHER CYTOPLASMIC TRNA 2-THIOLATION PROTEIN 1 9 324 IPR000541 GO:0000049|GO:0002098|GO:0034227
Mal2g0208 333 Hamap Cytoplasmic tRNA 2-thiolation protein 1 [CTU1]. 8 305 IPR000541 GO:0000049|GO:0002098|GO:0034227
Mal2g0208 333 PIRSF ATPase_YdaO 5 302 IPR035107 GO:0008033
Mal2g0208 333 PANTHER ATPASES OF THE PP SUPERFAMILY-RELATED 9 324 - -
Mal2g0208 333 Pfam Zinc-ribbon 270 300 IPR032442 -
Mal2g0208 333 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 32 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0208 Mal-Chr2 2612008 2613510 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0208 K14168 - gmx:100816096 583.563