Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0202 ATGAAGATGAGGTTGGCAATAATCCAAATCCCAATAGCAACAATACTATTACTAATTATAGGATGGTCCTGGGCAGAGCAATGCGGTAAACAAGCTGGGGGTGCACTGTGCCCCGGGGGATTATGCTGCAGCAAGTTTGGTTGGTGTGGATCAACCGGCGAATACTGCGGAGATGGTTGCCAGAGTCAATGTGGTGGAAGTAGTGGTGGGGGTAGCCTTGGTAGCCTAATCTCGAGGGACACCTTCAACAATATGCTCAAGCACCGCGACGACAGTGGGTGTCAGGGGAAAGGGTTTTACACCTATGACGCTTTCATTTCAGCTGCCAAGGCTTTCCCCAACTTTGCCAATAACGGAGATACAGCCACTAAAAAGAGGGAGATTGCTGCTTTCTTGGGTCAAACATCACACGAAACCACCGGTGGATGGGCAACTGCACCTGATGGCCCATACGCTTGGGGATATTGCTTTGTGAGAGAACAGAATCCCAGCACATACTGCCAACCAAGCTCTGAATTCCCATGTGCTTCTGGGAAGCAATACTACGGTAGGGGTCCCATCCAAATCTCTTGGAATTACAACTACGGACAGTGTGGAAGAGCAATTGGTGCTGACTTGCTCAACAATCCAGACCTCGTCGCCACCGACCCTGTTATATCCTTCAAGACCGCTCTATGGTTCTGGATGACACCCCAGTCACCCAAGCCATCATGCCATGACGTCATAACCGGAAGATGGAGCCCCTCAAGCGCAGATCGTGCTGCGGGGAGGCTTCCTGGATACGGTACTGTGACCAACATCATAAACGGAGGGCTTGAATGCGGCAGAGGACAGGATGGCAGAGTGCAGGATCGAATTGGATTTTACAAGAGATACTGTGACTTACTTGGAGTTGGTTACGGAGATAATCTTGACTGTTTTTCTCAGAGGCCTTTTGGATCTTCACTCTCATTATCATCACTCTTGCTCAATACCATCGCCGCCTAG 987 0.4995 MKMRLAIIQIPIATILLLIIGWSWAEQCGKQAGGALCPGGLCCSKFGWCGSTGEYCGDGCQSQCGGSSGGGSLGSLISRDTFNNMLKHRDDSGCQGKGFYTYDAFISAAKAFPNFANNGDTATKKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVREQNPSTYCQPSSEFPCASGKQYYGRGPIQISWNYNYGQCGRAIGADLLNNPDLVATDPVISFKTALWFWMTPQSPKPSCHDVITGRWSPSSADRAAGRLPGYGTVTNIINGGLECGRGQDGRVQDRIGFYKRYCDLLGVGYGDNLDCFSQRPFGSSLSLSSLLLNTIAA* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0202 328 ProSitePatterns Chitinases family 19 signature 2. 219 229 IPR000726 GO:0004568|GO:0006032|GO:0016998
Mal2g0202 328 ProSitePatterns Chitinases family 19 signature 1. 94 116 IPR000726 GO:0004568|GO:0006032|GO:0016998
Mal2g0202 328 Gene3D - 25 67 IPR036861 GO:0008061
Mal2g0202 328 PANTHER CHITINASE 2 14 315 - -
Mal2g0202 328 PRINTS Chitin-binding domain signature 35 43 IPR001002 GO:0008061
Mal2g0202 328 PRINTS Chitin-binding domain signature 50 57 IPR001002 GO:0008061
Mal2g0202 328 PRINTS Chitin-binding domain signature 43 50 IPR001002 GO:0008061
Mal2g0202 328 Pfam Chitin recognition protein 27 64 IPR001002 GO:0008061
Mal2g0202 328 CDD chitinase_GH19 77 306 - -
Mal2g0202 328 CDD ChtBD1_GH19_hevein 26 58 - -
Mal2g0202 328 ProSiteProfiles Chitin-binding type-1 domain profile. 25 66 IPR001002 GO:0008061
Mal2g0202 328 SUPERFAMILY Lysozyme-like 73 313 IPR023346 -
Mal2g0202 328 Gene3D - 76 306 - -
Mal2g0202 328 PIRSF Endochitinase 1 313 IPR016283 GO:0004568|GO:0005975
Mal2g0202 328 Pfam Chitinase class I 76 306 IPR000726 GO:0004568|GO:0006032|GO:0016998
Mal2g0202 328 PANTHER CHITINASE-RELATED 14 315 - -
Mal2g0202 328 ProSitePatterns Chitin recognition or binding domain signature. 37 56 IPR018371 GO:0008061
Mal2g0202 328 SUPERFAMILY Plant lectins/antimicrobial peptides 27 67 IPR036861 GO:0008061
Mal2g0202 328 Gene3D Endochitinase, domain 2 159 215 - -
Mal2g0202 328 SMART ChitinBD_3 27 64 IPR001002 GO:0008061
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0202 Mal-Chr2 2524361 2525347 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0202 25 321 Glycoside Hydrolase AT3G12500 69.307 6.09e-158 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0202 K20547 - pop:7470435 495.738