Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0093 ATGTTTGAAGCTTTCACCTTTGCTTTTCAAGACAAAGGGGTTGCCATGTCATCACTCAGTAGGGAGTTGGTGTTCTTGATCTTGCAGTTTCTCGAGGAGGAAAAGTTCAAAGAGGCTGTTCATAAGCTTGAACAGGAATCAGGGTTTTACTTTAACATGAAATATTTTGAAGATGAAGTGCACAATGGAAATTGGGATGAGGTTGAGAAGTACCTCTCTGGTTTCACTAAAGTTGATGATAATAGGTATTCTATGAAGATATTTTTCGAGATAAGGAAGCAGAAGTATCTTGAGGCATTGGACAAGCATGATCGGTCCAAGGGTGTCGAAATATTAGTGAAGGATTTGAAAGTGTTTTCTACTTTCAATGAAGAATTGTTCAAGGAAATCACACAGCTTTTGACATTGGAGAATTTCAGGGAAAATGAACAATTGTCCAAGTATGGTGATACAAAGTCTGCAAGAGCAATCATGTTGGTTGAGCTCAAAAAGTTGATTGAGGCAAATCCCTTATTTCGTGACAAATTGCAATTTCCCAACCTTAAGAACTCAAGGTTGCGGACTCTCATCAATCAAAGCTTGAATTGGCAGCATCAACTTTGTAAGAATCCACGGCCAAATCCAGATATAAAAACTCTTTTCGTGGATCACTCTTGTGGACAGCCAAATGGTGCACGGGCTCCATCACCTGCTAATATGCCGCTACTAGGATCTTTACCAAAGGTTGGAGGATTTCCTCCTCTTGGTGCACATGGGCCTTTTCAACCAACTCCAGCTCCTGTGCCGATGCCCTTGGCTGGTTGGATGTCAAATCCTACTACTGTGGCACATGCCTCAGTTTCTGGAGGAGGAGCTATAGGTCTTGGTGTTGGTGGACCATCAATGCCCGATCACATTTCTAAGAGAACAAGACCAATAGGAATGTCTGATGAGGGAAATCTACCTGTTAATGTTTTGTCGGCGACGTTTCCGGGTCATGGTCATGGCCAGGCTTTTAATTCACCTGATGACTTGCCAAAGACAGTCTTGCGAACTCTAAACCAAGGCTCGTCTCCTATGAGCATGGACTTTCATCCAGTTCAACAGACTTTACTTCTTGTTGGTACAAATGTGGCGGACATTGGTTTATGGGAATTAGGCTCTAGGGAGCGACTGGTCTTGAGGAACTTCAAAGTTTGGGATCTGAGTGCTTGTTCAATGCCATTTCAGGCTGCTCTTGTCAAAGATCCAGCTGTTTCTGTCAACCGTGTGACTTGGAGTCCTGACGGGGCTTTGTTCGGAGTTGCTTACTCAAGGCACATTGTTCAGATATACTCTTACCATGGTGGGGATGAAGTACGACAGCACTTGGAGATTGATGCTCATGTCGGCGGAGTAAATGATCTAGCATTTTCTCACCCAAATAAGCAGCTATGTGTGATCACATGTGGTGATGATAAGACAATTAAGGTGTGGGATGCTGCTACGGGTATAAAGCAATACACTTTTGAAGGTCATGAGGCTCCTGTTTATTCTGTCTGCCCGCATTATAAAGAAAACATTCAGTTCATCTTTTCAACGGCATTAGATGGAAAGATAAAAGCATGGTTGTATGACAATTTGGGATCTCGTGTTGACTATGATGCTCCTGGTCGGTGGTGTACAACCATGGCTTATAGTGCCGATGGTACAAGGCTCTTTTCGTGTGGGACTAGCAAGGAAGGGGAATCCTCTATTGTTGAGTGGAATGAAAGTGAAGGAGCTGTGAAAAGGACTTACCAAGGATTTCGGAAGCGATCTTTGGGAGTTGTACAATTTGATACAACCAAAAACCGATATCTAGCTGCTGGTGATGATTTCTCCATTAAATTTTGGGATATGGACAATATTCAGCTTTTGACAACTGTTGATGCTGATGGAGGTCTCCCAGCAAGCCCACGTATCCGTTTCAATAAGGATGGATCTCTTTTAGCTGTCTCTGCAAATGAGAATGGAATTAAAATCTTAGCCAATGGAGATGGTATTCGTCTGTTGCGCTCATTAGAGAATTCGATATATGATTCATCAAGAACATCAGAAGCCATGACAAAGCCTATAATAAATCCTATGTCAGTTGTTAATGCTGCAAGTAGTGCTGCACTTGCAGAGAGAGCCTCATCCGCGGCAGCTATTGCTGGAATGAATGGGGATGCCCGGAACTTAGGTGATATTAAACCTAGAATTAGTGAAGAATCCAATGACAAGTCAAAGATATGGAAGCTCACTGAAATCAATGAACCATCTCATTGTAGATCCTTGAAGCTACCTGAGAATGCAAGAGTCACCAAGATATCAAGGTTGATATATACTAATTCAGGTAATGCTATTCTGGCATTAGCTTCAAATGCCATTCATCTTCTCTGGAAATGGCAACGAAATGATCGTAACTCATCCGGCAAGGCTACTGCTAGTCTGCCACCTCAGTTGTGGCAACCTTCAAGTGGCATCCTGATGACTAATGACATTAATGATAACAATACCGAGGATGCAGTCCCATGCTTTGCTCTTTCCAAAAATGATTCTTATGTAATGTCAGCATCAGGCGGGAAGATTTCTCTGTTCAATATGATGACTTTTAAGACAATGACAACATTCATGCCACCACCGCCTGCAGCAACCTTTCTGGCTTTCCATCCTCAGGATAACAATATTATTGCTATAGGCATGGACGATTCTTCCATTCAGATATATAATGTCCGTGTAGATGAGGTTAAAAGTAAACTCAAAGGCCATACTAAAAGAGTAACTGGTCTTGCGTTTTCTCATGTACTGAATGTATTAGTTTCAGCTGGGGCAGATGGCCAGATTTTTGTATGGAATACTGATGGATGGGAGAAGCAGAAGAATAGATTCTTGCAATTTCCTGCTGGGAGAACTCCACCAGCACAGGCAGATACACGTGTGCAATTTCATCAGGACCAGTTCCGCTTCTTGGTGGTACATGAAACTCAGCTTGCCATTTATGAAGCAACAAAACTGGAATGTTTAAAGCAGTGGTTCCCACGAGATGCATCTGCACCAATATCATATGCAACTTTCTCATGTGATAGCCAGCTGATATTTGCCAGCTTTCTAGATGCAACAATCTGTGTATTTAGTGCTTCAAACCTTCGATTGCGATGCCGTATCAATCCTCTTGCTTATCTTTCCGCAAATGTCAGTTCTAACATTCAACCGCTTGTAATTGCTGCACATCCACACGAACCAAATCAGTTTGCTGTTGGACTGTCAGATGGCGTAGTTCATGTGTTTGAGCCCCTTGAGTCTGAAGGCAAGTGGGGGGTGCCTCCACCTATTGAGAATGGGTCAGCAAGCAATGCGGTAGCTAATTCGGTTGGTGCTTCTTCTGATGAAGTCCAAAGATGA 3384 0.4276 MFEAFTFAFQDKGVAMSSLSRELVFLILQFLEEEKFKEAVHKLEQESGFYFNMKYFEDEVHNGNWDEVEKYLSGFTKVDDNRYSMKIFFEIRKQKYLEALDKHDRSKGVEILVKDLKVFSTFNEELFKEITQLLTLENFRENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPNLKNSRLRTLINQSLNWQHQLCKNPRPNPDIKTLFVDHSCGQPNGARAPSPANMPLLGSLPKVGGFPPLGAHGPFQPTPAPVPMPLAGWMSNPTTVAHASVSGGGAIGLGVGGPSMPDHISKRTRPIGMSDEGNLPVNVLSATFPGHGHGQAFNSPDDLPKTVLRTLNQGSSPMSMDFHPVQQTLLLVGTNVADIGLWELGSRERLVLRNFKVWDLSACSMPFQAALVKDPAVSVNRVTWSPDGALFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDLAFSHPNKQLCVITCGDDKTIKVWDAATGIKQYTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAWLYDNLGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSKEGESSIVEWNESEGAVKRTYQGFRKRSLGVVQFDTTKNRYLAAGDDFSIKFWDMDNIQLLTTVDADGGLPASPRIRFNKDGSLLAVSANENGIKILANGDGIRLLRSLENSIYDSSRTSEAMTKPIINPMSVVNAASSAALAERASSAAAIAGMNGDARNLGDIKPRISEESNDKSKIWKLTEINEPSHCRSLKLPENARVTKISRLIYTNSGNAILALASNAIHLLWKWQRNDRNSSGKATASLPPQLWQPSSGILMTNDINDNNTEDAVPCFALSKNDSYVMSASGGKISLFNMMTFKTMTTFMPPPPAATFLAFHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHTKRVTGLAFSHVLNVLVSAGADGQIFVWNTDGWEKQKNRFLQFPAGRTPPAQADTRVQFHQDQFRFLVVHETQLAIYEATKLECLKQWFPRDASAPISYATFSCDSQLIFASFLDATICVFSASNLRLRCRINPLAYLSANVSSNIQPLVIAAHPHEPNQFAVGLSDGVVHVFEPLESEGKWGVPPPIENGSASNAVANSVGASSDEVQR* 1128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0093 1127 MobiDBLite consensus disorder prediction 1109 1127 - -
Mal2g0093 1127 Gene3D - 540 689 IPR015943 GO:0005515
Mal2g0093 1127 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 914 946 - -
Mal2g0093 1127 MobiDBLite consensus disorder prediction 1100 1127 - -
Mal2g0093 1127 SUPERFAMILY 3-carboxy-cis,cis-mucoante lactonizing enzyme 932 1096 - -
Mal2g0093 1127 SMART ctlh 49 107 IPR006595 -
Mal2g0093 1127 PANTHER TOPLESS-LIKE PROTEIN 16 1127 - -
Mal2g0093 1127 ProSitePatterns Trp-Asp (WD) repeats signature. 473 487 IPR019775 -
Mal2g0093 1127 SUPERFAMILY WD40 repeat-like 340 445 IPR036322 GO:0005515
Mal2g0093 1127 SMART Lish 19 51 IPR006594 GO:0005515
Mal2g0093 1127 ProSiteProfiles LIS1 homology (LisH) motif profile. 19 51 IPR006594 GO:0005515
Mal2g0093 1127 ProSiteProfiles Trp-Asp (WD) repeats profile. 452 495 IPR001680 GO:0005515
Mal2g0093 1127 ProSiteProfiles Trp-Asp (WD) repeats profile. 597 628 IPR001680 GO:0005515
Mal2g0093 1127 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 417 951 IPR011047 -
Mal2g0093 1127 ProSiteProfiles Trp-Asp (WD) repeats profile. 914 946 IPR001680 GO:0005515
Mal2g0093 1127 PANTHER TOPLESS-RELATED PROTEIN 1-RELATED 16 1127 IPR027728 GO:0006355
Mal2g0093 1127 Gene3D - 308 539 IPR015943 GO:0005515
Mal2g0093 1127 Pfam WD domain, G-beta repeat 913 946 IPR001680 GO:0005515
Mal2g0093 1127 Pfam WD domain, G-beta repeat 452 486 IPR001680 GO:0005515
Mal2g0093 1127 Gene3D - 802 1092 IPR015943 GO:0005515
Mal2g0093 1127 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 49 107 IPR006595 -
Mal2g0093 1127 SMART WD40_4 400 439 IPR001680 GO:0005515
Mal2g0093 1127 SMART WD40_4 533 576 IPR001680 GO:0005515
Mal2g0093 1127 SMART WD40_4 339 378 IPR001680 GO:0005515
Mal2g0093 1127 SMART WD40_4 998 1039 IPR001680 GO:0005515
Mal2g0093 1127 SMART WD40_4 819 861 IPR001680 GO:0005515
Mal2g0093 1127 SMART WD40_4 907 946 IPR001680 GO:0005515
Mal2g0093 1127 SMART WD40_4 445 486 IPR001680 GO:0005515
Mal2g0093 1127 SMART WD40_4 579 619 IPR001680 GO:0005515
Mal2g0093 1127 SMART WD40_4 864 904 IPR001680 GO:0005515
Mal2g0093 1127 SMART WD40_4 1048 1091 IPR001680 GO:0005515
Mal2g0093 1127 SMART WD40_4 489 530 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0093 Mal-Chr2 1043203 1050292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0093 450 663 Miscellaneous Gene Families AT5G08390 23.288 5.92e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0093 - - gmx:100790282 2026.14