Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0087 ATGCAACCTTCTTCCCCTGTTTCTCTTCCGACGCCAAACCCAAAGGACTACACCTGCTTTACTGCCATGGAGTTGCCTAATTCTGAATTACAACCGAATAAGCGTATGAAAAGGAAATCTGCTGTATGGGAACACTTCACTGTGGAAAAAACTGATGAACCAGGATGTGTCAGGGCCCGCTGTAAAGGTTGCGAAAAATTGTTTGCTTACATGAATGGTTCAAAACAATCTGGCACCAGCCATCTCCGTAGGCACGTTTTAATATGTCTGAAAAATCAGGAAGCCAAGCGTTCCAAAACTGGTATTGATCCACCTAAGAGGCGAGCTAGAGCAAAACCTTCCAAAACTGGTGTTGATCAACATAAGAAGCAAGATAGAGAAAAACCTTACTTTACTTCTATCTCATTTGATCAGGAGCATTGCAATGATAAGATTGCGAAAATGATTATTTTACACGATTATCCACTGCATATTGTGGAACACAAAGGTTTCATTGATTTTGCGCAGGCACTTCAACCGCAGTTCAATCCACTGAGCTTAAACACTGTCCAAGGGGATTGTGTTTCCATTTACCTCAGAGAGAAGCAAAACCTTTTGAATCTTATTGACGGGATTCCTGGACGAGTCAACCTCACCTTGGACTTGTGGACTTCAAATCAGGAAATGGGCTATGTTTTTCTTCGTGGGCACTTCATCGATGGTGATTGGAACTTCCATCATCCCATTCTTAATGTTTTTGCAGTGCCATTTCCTGATTTGGATGGTTCCTTAAATCAAACTGTAGTGACATGCCTAAAGAATTGGCATTTAAAGGGTCGCCTGTTTTCCGTTCTATTTGATAAACTCTTTTCCAATGAGACTTTGATGGGAAATGTGAGGGATCTCCTCTCTCTTAAAAACCCTGTGATCCTCAATGGTCAACTATTAAGACAGAGTTGTTATGCTCGTGTGCTCAGTTGCCTTGCATTAGATGTTCTTTGGGCAATGCAAGAAACTATTGCCAAAGTTCGGAAGAGTGTGCAATATGTGAAATCATCAAAATCGATTGAAGATAAGTTTCTGGAGCTTAAGCAACTACTTCAAGTTCCAAGTAAGATGGATCTGTTGATTGATGACAACAATAAATGGGACACAGTCTACCATATGCTTGTTGCTGCCTGTGAATTGAAGGAAGTTTTTTCATGTTTTGATGCCTACGATTCCAATTACACAATGTCCCTTACCATGGATGATTGGAAGCAGGTTGAAAATCTCTGTGCATGTTTGAAGTTTTTGTATGATGCTGCTAAATTTTTAACCATCCAACCGTACTCAACTACAAACTTGTTTTTCCTCGAAGTATCCAAACTTAAGTTGCAGTTGACTGAGGCGAGCCAGGATCCTTTCTGTTGTAGTTTGATTACGTCTCTGCAAGAGAAGTTTGATCAGTATTGGAGAGAAAGCTGCTTCATCTTAGCAATTGCTGTAGCCATGGATCCAAGGTTTAAAATGAACCTCGTGGAATCTACTTTTGCTAAGATATTTGGTGAGAATGCTGAGCAATGGATAAGAGCTGTTGAGGATGGTCTTCAAGAATTGTTCCTCGAATATAGTATCATGCAAGTGCTTCCTTTTACCGAAACAAATTTTGATGTTGGGTATGAGAATGAGACTATGGTGAAGACTGAGGCATTTCAAGAAGTATCACTTGATGAGTCTTTTTTTCATACTGAAGATGGTCTTACTGACATTGAATTCTATATATCCGACTTCACTACTAACCAACAATTTAAGTCGGAATTGAATGTGTATATGGAAGAGCCTCTAGAGTCGAGTGTACAAGAATTTGATATACTGAGCTGGTGGAGAAATAATGGATCCAAGTACCCAACATTGTCCAGAATGGCATCTGATATTTTATCTATGCCGGTATCCACTCTCTCTGCAGATTCTATTTTTGACACAGAAATTAGGAAAATGGATAACTACCGGAGTTCGTTAGACTCTGTGACTCTTGAGGCCCTTATTTGTACTAAAGATTGGTTCCATTGTGAATCAACACCTATTGATGTTTCACGTGCACTTGTGAAAATGGAGTATTAG 2082 0.3982 MQPSSPVSLPTPNPKDYTCFTAMELPNSELQPNKRMKRKSAVWEHFTVEKTDEPGCVRARCKGCEKLFAYMNGSKQSGTSHLRRHVLICLKNQEAKRSKTGIDPPKRRARAKPSKTGVDQHKKQDREKPYFTSISFDQEHCNDKIAKMIILHDYPLHIVEHKGFIDFAQALQPQFNPLSLNTVQGDCVSIYLREKQNLLNLIDGIPGRVNLTLDLWTSNQEMGYVFLRGHFIDGDWNFHHPILNVFAVPFPDLDGSLNQTVVTCLKNWHLKGRLFSVLFDKLFSNETLMGNVRDLLSLKNPVILNGQLLRQSCYARVLSCLALDVLWAMQETIAKVRKSVQYVKSSKSIEDKFLELKQLLQVPSKMDLLIDDNNKWDTVYHMLVAACELKEVFSCFDAYDSNYTMSLTMDDWKQVENLCACLKFLYDAAKFLTIQPYSTTNLFFLEVSKLKLQLTEASQDPFCCSLITSLQEKFDQYWRESCFILAIAVAMDPRFKMNLVESTFAKIFGENAEQWIRAVEDGLQELFLEYSIMQVLPFTETNFDVGYENETMVKTEAFQEVSLDESFFHTEDGLTDIEFYISDFTTNQQFKSELNVYMEEPLESSVQEFDILSWWRNNGSKYPTLSRMASDILSMPVSTLSADSIFDTEIRKMDNYRSSLDSVTLEALICTKDWFHCESTPIDVSRALVKMEY* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0087 693 PANTHER BED FINGER-RELATED 24 681 IPR045259 -
Mal2g0087 693 SUPERFAMILY beta-beta-alpha zinc fingers 40 93 IPR036236 -
Mal2g0087 693 SUPERFAMILY Ribonuclease H-like 202 676 IPR012337 -
Mal2g0087 693 Pfam Domain of unknown function (DUF4413) 436 530 IPR025525 GO:0003677
Mal2g0087 693 SMART bed5 37 92 - -
Mal2g0087 693 MobiDBLite consensus disorder prediction 96 125 - -
Mal2g0087 693 Pfam hAT family C-terminal dimerisation region 593 675 IPR008906 GO:0046983
Mal2g0087 693 PANTHER ZINC FINGER BED DOMAIN-CONTAINING PROTEIN DAYSLEEPER-LIKE ISOFORM X1 24 681 - -
Mal2g0087 693 ProSiteProfiles Zinc finger BED-type profile. 37 100 IPR003656 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0087 Mal-Chr2 966847 970217 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0087 - - gmx:106795554 971.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0087 2 966847 970217 Mal2g0087 2 966847 970217 PCT