Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0084 ATGGTTCTCGCTGAATTAGGAACGAGCATTACTCGTGCTCTTCAGAATATGAACAATGCAACGGTGATCGACGAGAAAGCTCTCAACGATTGTCTCAAAGAGATCGCTCGAGCTCTCATTCAATCCGATGTTCGATTGGAGCTTATTCGAGACATGCAGAACAATATCAAGAAGATTGTTAATCTTGAAGAACTTGCCGCCGGTCACAATAAACGGAAAATCATTCAACAAGCTGTGTTTAAGGAACTCTGCAACATGTTGAATCCTGGGAAGCCATGTTTTGTTCCCAAAAGAGGAAAAACAAGTGTTGTCATGTTTGTTGGTTTACAAGGTTGTGGAAAAACTACAACGTGTACAAAATATGCACATTATTATCAGAAGAAAGGATGGAAGCCGGCTTTAGTGTGTGCAGATACATTTAGAGCTGGTGCATTTGATCAATTGAAGCAAAATGCCACCAAAGCTAAGATCCCTTTTTATGGAAGCTATGTGGAGTCAGATCCTGTCAAAATTGCCGTGGAAGGTGTGGAGAGATGCAAGGAAGAAAACCATGATCTTATAATTGTTGATACCAGTGGGCGGCACAAACAAGAAGCGTCTCTTTTTGAAGAAATGCGACAAGTTTCAGAAGCTACGAAACCAGATTTTGTTATATTTGTTATGGATAGCAGTATTGGTCAGGCTGCTTTTGATCAGGCCCAAGCATTTAAACAAAGTGTTGCCGTTGGAGCTGTAATTATTACCAAAATGGATGGCCATGCCAAAGGTGGTGGTTCTCTTAGCGCTGTTGCAGCAACAAAGAGTCCTGTCATATTCATAGGAACTGGTGAACATATGGATCAGTTTGAAGTATTCGAAGTTCAGCCGTTTGTTAGTCGTCTATTAGGCATGGGGGACTTGTCTGGGTTAATAGACAAAATTCATGGAGTTGTTCCAATGGATCAACAGCCTGAGTTTCTTCAAAAACTGTCAAAAGGAAACTTCACCTTGAGGATTATGTATGAGTACTTTCAGAACATACTTAAAATGGGTCCTATGAGCGAGCTTGTTTCTATGCTTCCGGGATTTAGTTCTGAGTTAATACCACAAGGCCATGAGAAAGAAAGCTCGGCAAAATTTAAGCGTTACATGACAATGATGGATTCAATGACAAATGAAGAGTTGGATAGTTCAAACCCAAAGTTCATGAATGCATCACGTATGATGCGAATAGCTCGAGGTTCTGGTCGTCTAGTCAGGGAAGTGTTGGAGTTGATGGAAGAGTACAAACGTTTTGCAAAGATACTGAGTAAGCTATCTCAAAGTAGGAATCCACAGAACATAGCCAAATTCCTCCCTCCACATTTGCAGAAGCAACTTGGTGGCGTCAATGAGTTACAAAAAATGATGAAGAAGATAGGAACTATAACGACATGA 1416 0.4075 MVLAELGTSITRALQNMNNATVIDEKALNDCLKEIARALIQSDVRLELIRDMQNNIKKIVNLEELAAGHNKRKIIQQAVFKELCNMLNPGKPCFVPKRGKTSVVMFVGLQGCGKTTTCTKYAHYYQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYVESDPVKIAVEGVERCKEENHDLIIVDTSGRHKQEASLFEEMRQVSEATKPDFVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDGHAKGGGSLSAVAATKSPVIFIGTGEHMDQFEVFEVQPFVSRLLGMGDLSGLIDKIHGVVPMDQQPEFLQKLSKGNFTLRIMYEYFQNILKMGPMSELVSMLPGFSSELIPQGHEKESSAKFKRYMTMMDSMTNEELDSSNPKFMNASRMMRIARGSGRLVREVLELMEEYKRFAKILSKLSQSRNPQNIAKFLPPHLQKQLGGVNELQKMMKKIGTITT* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0084 471 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 98 298 IPR027417 -
Mal2g0084 471 Hamap Signal recognition particle 54 kDa protein [srp54]. 6 463 IPR022941 GO:0003924|GO:0005525|GO:0006614|GO:0048500
Mal2g0084 471 Gene3D - 91 285 IPR027417 -
Mal2g0084 471 PANTHER SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54 1 468 IPR022941 GO:0003924|GO:0005525|GO:0006614|GO:0048500
Mal2g0084 471 Pfam SRP54-type protein, GTPase domain 102 296 IPR000897 GO:0005525|GO:0006614
Mal2g0084 471 Pfam SRP54-type protein, helical bundle domain 6 83 IPR013822 GO:0005525|GO:0006614
Mal2g0084 471 CDD SRP54_G 102 294 - -
Mal2g0084 471 Pfam Signal peptide binding domain 327 428 IPR004125 GO:0006614|GO:0008312|GO:0048500
Mal2g0084 471 ProSitePatterns SRP54-type proteins GTP-binding domain signature. 269 282 IPR000897 GO:0005525|GO:0006614
Mal2g0084 471 SUPERFAMILY Domain of the SRP/SRP receptor G-proteins 1 91 IPR036225 -
Mal2g0084 471 SMART SRP54_3 101 296 IPR000897 GO:0005525|GO:0006614
Mal2g0084 471 TIGRFAM SRP54_euk: signal recognition particle protein SRP54 2 427 IPR006325 GO:0003924|GO:0005525|GO:0006614|GO:0008312|GO:0048500
Mal2g0084 471 Gene3D - 5 306 IPR042101 -
Mal2g0084 471 SUPERFAMILY Signal peptide-binding domain 298 432 IPR036891 GO:0006614|GO:0008312|GO:0048500
Mal2g0084 471 SMART SRP54_N_2 2 87 IPR013822 GO:0005525|GO:0006614
Mal2g0084 471 SMART AAA_5 100 277 IPR003593 -
Mal2g0084 471 Gene3D - 310 445 IPR036891 GO:0006614|GO:0008312|GO:0048500
Mal2g0084 471 PANTHER SIGNAL RECOGNITION PARTICLE 54 KDA PROTEIN 1 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0084 Mal-Chr2 945685 950663 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0084 K03106 - jre:109013924 752.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0084 2 945685 950663 Mal2g0084 2 945685 950663 PCT