Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0033 ATGGAAGCAGCGCGGCGGCTGGTGTGGCGTTTACGTGCGGTTCCGATGCCGGTGCTCTCAAACGGTGTCGTATCACTCTCTTCTTCATCTTCTAGCTGTAACACCAAAATCCAACTATTGAATACGCAATTTTCCAAATTCAGCTCAGCATCATCATCATCACGTTATTCTTATTCAGAAACAGCATCACTAAGGAAAACAGTGAATAAATTGCCCTACATTGTAAAAGCCGGCGACCCAGTTCTGCACGAGCCTGCACGTGACGTTGATCCCAGTGAGATCAAATCAGAAAAGATTCAGAATATGATCGATGAAATGATTCTTGTAATGAGAAAAGCCCCTGGAGTTGGTCTTGCTGCCCCACAAATTGGTATTCCCTTAAGGATAATTGTTTTGGAAGATAAAGAAGAATTTATTAGTTACAACACAGAGGAGGAGACCAAAGCACAAGATAGAAGAGCTTTTGATCTTTTGGTGATTCTGAATCCCAAATTAAAGAACAAGAGCAACAGGACCACCTTCTTTTTTGAAGGGTGCTTGAGTGTTGATCGATTTCAAGCTATGGTAGAACGGTACCTTGATGTCGAGGTGTCAGGTTTTGATCGTTATGGTGAGCCAATCAAAATAAATGCTTCTGGTTGGCAGGCTCGGATTTTACAGCATGAGTGTGATCACCTAGATGGAACTCTATATGTCGATAAGATGGTACCTAGAACTTTCAGAAGTTGGAAAAATGTGGATCTACCTCTTGCCCATGGGTGCCCCAAACTTGGCCCCCGAGCATAA 786 0.4313 MEAARRLVWRLRAVPMPVLSNGVVSLSSSSSSCNTKIQLLNTQFSKFSSASSSSRYSYSETASLRKTVNKLPYIVKAGDPVLHEPARDVDPSEIKSEKIQNMIDEMILVMRKAPGVGLAAPQIGIPLRIIVLEDKEEFISYNTEEETKAQDRRAFDLLVILNPKLKNKSNRTTFFFEGCLSVDRFQAMVERYLDVEVSGFDRYGEPIKINASGWQARILQHECDHLDGTLYVDKMVPRTFRSWKNVDLPLAHGCPKLGPRA* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0033 261 PANTHER PEPTIDE DEFORMYLASE 31 260 - -
Mal2g0033 261 TIGRFAM pept_deformyl: peptide deformylase 74 238 IPR023635 GO:0042586
Mal2g0033 261 Hamap Peptide deformylase [def]. 70 246 IPR023635 GO:0042586
Mal2g0033 261 PRINTS Peptide deformylase signature 104 133 IPR023635 GO:0042586
Mal2g0033 261 PRINTS Peptide deformylase signature 208 237 IPR023635 GO:0042586
Mal2g0033 261 PRINTS Peptide deformylase signature 177 188 IPR023635 GO:0042586
Mal2g0033 261 PRINTS Peptide deformylase signature 189 207 IPR023635 GO:0042586
Mal2g0033 261 PANTHER PEPTIDE DEFORMYLASE 31 260 IPR023635 GO:0042586
Mal2g0033 261 Gene3D Peptide deformylase 70 259 IPR036821 -
Mal2g0033 261 CDD Pep_deformylase 74 231 IPR023635 GO:0042586
Mal2g0033 261 Pfam Polypeptide deformylase 74 238 IPR023635 GO:0042586
Mal2g0033 261 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 33 - -
Mal2g0033 261 SUPERFAMILY Peptide deformylase 71 243 IPR036821 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0033 Mal-Chr2 419940 423876 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0033 K01462 - csv:101216450 316.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0032 2 414709 417369 Mal2g0033 2 419940 423876 PCT