Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g6162 ATGCACTTGAGCGAGAATGAAGGAATTGAGGGGAAGACCTTCGTGGTCACCGGTGGACTCGGATTCGTAGGATCTGCTCTCTGCTTGGAACTCATACGAAGAGGTGCTCAAGAGGTTCGAGCCTTTGACCTCCGCCAATCTTCTCCTTGGTCGCATCTTCTTAAAACAAGGGAGTCAACTGCATACAAGGTTGGGGATGTTGCCCGCAAAGTGGATGTTGAAAGGGCACTCCGCGGTGCAGAATGTGTATTCCACCTTGCTGCCTTTGGGATGTCAGGAAAAGAGATGCTGCAATTCGGTCGAGTTGATGAAGTCAATATAAATGGGACATGCCATGTTCTTGACGCTTGCCTTGACCTTGGCATCAAAAGGCTTGTCTATTGTAGCACATACAATGTTGTCTTTGGGGGTCAAAAGATCCTCAACGGAAATGAGGCCTTGCCGTATTTCCCAATTGATAGTCATGTTGATCCATACGGCCGCAGTAAATCAATTGCTGAACAATTGGTTCTAAAGAATAATGCCCGCCCTCTCAAGAATGACACCGGGAATCGTCTATACACTTGTGCTGTTCGTCCAGCTGCAATCTATGGACCGGGGGAAGACAGGCACCTTCCAAGGATCATAACCATGGCAAGGTTAGGTCTGCTTCTGTTCAGAATTGGCGACAAAACTGTAAAGTCAGATTGGGTTTTTGTGGATAACCTTGTCCTTGCTCTTATAATGGCAAGTATGGGACTTTTGGATGACAACAATGACAAGGGAAAACTACCTATAGCTGCTGGCCAGGCATACTTTATATGTGACGGTTCACCTGTCAATTCTTTTGAATTCCTCCAACCTCTGCTCAGGAGCTTGGATTATGAACTACCAAAAACATCTTTAGCTCTCAAACATGCTCTTGTTCTTGGGAAGATTTGCCAGGGTGTTTATACGATCTTATATCCATTGCTTAATCGGTGGTGGCTCCCTCAACCATTCATCCTTCCGAGTGAAGCACACAAGGTGGGAGTGACTCACTATTTTTCTTATCTTAAAGCCAAAGAGGAGCTTGGCTATGTTCCCATGGTGACCCCGCGAGAGGGGATGGATTCTACCATATCTTACTGGAAACAGAGGAAAAGGCAAATTCTGGATGGGCCTACCATCTATACTTGGCTGTTTTGTGTGGTTGGAATGACCTCACTATTCTGTGCTGCTTTCCTACCAGACATAGGGATTATGTTTCTTCTCAGAGCTATAAATCTATTCGTCTTTCGGTCAATGTGGATGACAAGGCTGGTATTCATTTTAGCGACAGCTGCACATGTCATTGAGGCCATTTATGCTTGGTACCTGGCTAAAAGGGTGGATCCTGCCAATGCAAGAGGCTGGTTTTGGCAAACATTTGCTCTGGGATTCTTTTCATTGCGTTTTCTGTTGAAAAGAGCAAGGGAATAA 1440 0.4556 MHLSENEGIEGKTFVVTGGLGFVGSALCLELIRRGAQEVRAFDLRQSSPWSHLLKTRESTAYKVGDVARKVDVERALRGAECVFHLAAFGMSGKEMLQFGRVDEVNINGTCHVLDACLDLGIKRLVYCSTYNVVFGGQKILNGNEALPYFPIDSHVDPYGRSKSIAEQLVLKNNARPLKNDTGNRLYTCAVRPAAIYGPGEDRHLPRIITMARLGLLLFRIGDKTVKSDWVFVDNLVLALIMASMGLLDDNNDKGKLPIAAGQAYFICDGSPVNSFEFLQPLLRSLDYELPKTSLALKHALVLGKICQGVYTILYPLLNRWWLPQPFILPSEAHKVGVTHYFSYLKAKEELGYVPMVTPREGMDSTISYWKQRKRQILDGPTIYTWLFCVVGMTSLFCAAFLPDIGIMFLLRAINLFVFRSMWMTRLVFILATAAHVIEAIYAWYLAKRVDPANARGWFWQTFALGFFSLRFLLKRARE* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g6162 479 Pfam Transmembrane protein 254 388 474 IPR028110 -
Mal1g6162 479 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 15 296 IPR002225 GO:0003854|GO:0006694|GO:0016616
Mal1g6162 479 Gene3D - 3 376 - -
Mal1g6162 479 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 362 - -
Mal1g6162 479 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 42E MEMBER 1 9 362 - -
Mal1g6162 479 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 378 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g6162 Mal-Chr1 140768307 140771254 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g6162 1 479 Lipid Metabolism Gene Families AT2G33630 67.432 0.0 687
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g6162 - - gmx:100808827 822.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g6162 1 140768307 140771254 Mal1g6162 1 140768307 140771254 ECH