Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g6105 ATGATAGCAAAAGACTTCCACGACGAAGAAAAATGGCTCGCCGAAGGAATCGCCGCCATTCAACACAACGCTTTCTTCATGCATCGCGCCTTGGATGATAATAATCTCAGAGACTCACTCAAATACTCAGCGCAGATGCTATCTGAACTTCGAACTTCTAGACTCTCACCTCATAAATATTATGAACTATATATGAGAGCTTTTGATGAGTTACGGAGGTTGGAGATGTTCTTTAAAGACGAAAGTAGACACGGTGTTTCAATCGTTGATCTGTACGAGCTTGTTCAACATGCGGGGAACATATTGCCTAGATTGTATCTTCTTTGCACGGTTGGATCCGTTTACCTTAGATGTAAGGATACTCCTGTAAGGGATGTTCTTAAAGACCTAGTGGAAATGTGTCGCGGCGTTCAGCATCCAATTCGGGGTCTGTTTTTGAGGAGTTATCTTTCTCAAGTCAGCAGAGACAAGCTGCCTGATATTGGCTCTGAATACGAAGATAGGGATTTTGGCAGTGTAAAGGATGCAGTTGAATTTGTTCTAGAGAATTTCTCAGAAATGAATAAGCTCTGGGTTCGATTGCAACATCAGGGAGCTGGTCAAGTAAAAGAGAAGAAAGATAAAGAAAGGAATGAGCTTCGCGATCTTGTAGGGAAAAACCTCCACGTTCTGAGTCAGATAGATGGTGTGGACCTTGAGATGTACAAAGACACTGTCCTTCCAAGTGTTCTAGAGCAGGTTGTCAACTGTAAAGATGAGCTTGCACAATTTTATCTCATGGAGTGCATAATCCAGGTTTTTCCAGATGAATACCACTTGCAGACACTTGAGACACTCTTAGGTGCTTGCCCCCAATTGCAGCCCACAGTAGACATCAAGACAGTGTTATCTCAGTTAATGGACAGGTTATCAAATTATGCTGCCTCAAGTACTGAAGTATTACCCGAGTTTTTGCACGTGGAAGCATTTACCAAACTAAGCACCGCAATAAGCAGGGTGATAGAAGCTCAGGTTGACATGCCTATTGTGGGTGCAATAGCTTTGCATGTCTCTCTTCTTACATTTACTCTTCGAGTTCATCCAGATCGACTTGATTATGTGGATCAAGTACTGGGATCATGTGTCAATAAGCTGTCTGGAAAACCAAAGCTTGATGACAATAGAGCAACAAAGCAAGTTGTAGCACTTTTAAGCGCCCCACTTGATAAATACAATGATGTTGTGACTGCACTGACACTTTCCAATTATCCTCGTGTTATGATTCATCTTGATAATGTGACAAATAAACTCATGGCTCTGGTTATTATCCAAAGTATTATGAAGAATAACACTTACATATCTACTGCCGATAAGGTTGAAGTTTTATTTGAATTAATAAAAGGGCTCATAATAGATTTGGACGGAACATCTGAGGATGAGATCGATGAAGAAGATTTCAGTGAGGAACAGAATTCTGTTGCCCGCCTCATAAATATGCTTCATAACAATGACCCAGAGGAAATGTTCAAGATAATATGTACAGTAAAGAAACATATTATGAGTGGAGGACCAAGGCGCCTACCTTTCACTGTTCCTTCTCTTATATTTTCTGCACTCAAGTTGATCAGGCAATTGCAAGGCCAAGGCGGAGACATAGCAGGAGAAGAAGAACCTGCAACACCCAGAAAAATATTTCAGCTTTTAAATGAGACCATCGAAGTTCTATCTTCTGTACCATCTCCTGAACTGGCCCTGAGACTGTATCTGCACTGTGCTGAGGCTGCTGATGACTGTGACCTGGAGCCTGTTGCTTATGAATTTTTCACTCAGGCATTTGTATTATATGAAGAAGAAATTGCGGACTCTAAAGCCCAGGTAACTGCAATACATTTAATTATTGGGACTCTCCAGAGAATGAGCATCTTTGGCGTTGAGAACAGGGATACATTAACACACAAGGCCACAGGGTATTCTGCAAAGCTTTTGAAGAAACCTGATCAGTGTCGAGCTGTTTATGCATGCTCACATCTCTTTTGGGTTGATGATCAAGATGGTATCAAAGATGGAGAAAGGGTGTTGCTTTGCCTCAAGCGTGCTTTGAGGATTGCAAATGCTGCTCAGCAAATGGCCAATGTAGCCAGGGGTAGCAGCGGTCCAGTGACGCTTTTTGTTGAAATACTGAACAAGTACATTTATTATTTTGAGAAAGGAAATCCACAGATCACTAGTGCTACTATCCAGGGGCTTATAGAATTAATCAAGACTGAGATGCAGAGTGACTCTGCATCAGTTCTTCCAGCTTCAGATCCTTTCTTTGCTAGCACACTGAGGTACATTCAATTTCAAAAACAGAAGGGCGGTATACTGGGTGAAAAATACGATTCTATCAAGGTCTAA 2376 0.4154 MIAKDFHDEEKWLAEGIAAIQHNAFFMHRALDDNNLRDSLKYSAQMLSELRTSRLSPHKYYELYMRAFDELRRLEMFFKDESRHGVSIVDLYELVQHAGNILPRLYLLCTVGSVYLRCKDTPVRDVLKDLVEMCRGVQHPIRGLFLRSYLSQVSRDKLPDIGSEYEDRDFGSVKDAVEFVLENFSEMNKLWVRLQHQGAGQVKEKKDKERNELRDLVGKNLHVLSQIDGVDLEMYKDTVLPSVLEQVVNCKDELAQFYLMECIIQVFPDEYHLQTLETLLGACPQLQPTVDIKTVLSQLMDRLSNYAASSTEVLPEFLHVEAFTKLSTAISRVIEAQVDMPIVGAIALHVSLLTFTLRVHPDRLDYVDQVLGSCVNKLSGKPKLDDNRATKQVVALLSAPLDKYNDVVTALTLSNYPRVMIHLDNVTNKLMALVIIQSIMKNNTYISTADKVEVLFELIKGLIIDLDGTSEDEIDEEDFSEEQNSVARLINMLHNNDPEEMFKIICTVKKHIMSGGPRRLPFTVPSLIFSALKLIRQLQGQGGDIAGEEEPATPRKIFQLLNETIEVLSSVPSPELALRLYLHCAEAADDCDLEPVAYEFFTQAFVLYEEEIADSKAQVTAIHLIIGTLQRMSIFGVENRDTLTHKATGYSAKLLKKPDQCRAVYACSHLFWVDDQDGIKDGERVLLCLKRALRIANAAQQMANVARGSSGPVTLFVEILNKYIYYFEKGNPQITSATIQGLIELIKTEMQSDSASVLPASDPFFASTLRYIQFQKQKGGILGEKYDSIKV* 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g6105 791 PIRSF Retromer_Vps35 3 791 IPR005378 GO:0015031|GO:0030906|GO:0042147
Mal1g6105 791 Pfam Vacuolar protein sorting-associated protein 35 12 748 IPR005378 GO:0015031|GO:0030906|GO:0042147
Mal1g6105 791 Gene3D - 467 776 IPR042491 -
Mal1g6105 791 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 35A 2 791 - -
Mal1g6105 791 PANTHER VACUOLAR SORTING PROTEIN 35 2 791 IPR005378 GO:0015031|GO:0030906|GO:0042147
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g6105 Mal-Chr1 139975128 139983863 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g6105 K18468 - gmx:100775573 1417.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g6105 1 139975128 139983863 Mal1g6105 1 139975128 139983863 ECH