Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g6099 ATGACTCTTGAAGATTTCTTTACCTTGACTGAGATGAAAGATGGGCTCACAACCCCTTCTCGAGTGCAGGAGTTGGTCTCTGTAATGAAGAAGGAGCAAGACAGTGTTGTGAAGAACGCTGGTGATGTAATGAGACAATGGGCTGCTGTTGCAAGCACTATTGCTGCAACAGAGAGTAAAGATTGCCTTGATCTTTTTATTCAATTAGATGGACCGCGGTTCATCGATAGATGGTTAAATGATGCTAAAAAAATTGGTGCTGGTACAAATGATAGCGTCATGGAAGAGTCAATTATTGCAATGTTACGTGCAGTTGAAAAGCTATATCTAGACAGCGAGAAGCCAATTTCATCAGGAATTCGGGCCACTGTAAGTAACTTCCTTGCTCATCACAGCTCTAAGGTTCAGGATAGTGCAAGAGTATTATTTGGCAAGTGGAAAGGAGTTGGAAATGGAGATGCTGAATCTCATGATATGGATACTGGTCAAAGAAACCATATGATTGATAAGAATCTCAAGGAGGAAGGCCAGTTGTCTTCAGTGAACGGGGCTAATAATGACAATGATCATGTGTTGCGACTTGAAGGGGGTGAGAAGTCTATACTGAGAAGTTCAGATACTCAGATACCAGATAAGGCTGCTAATGTAAAGAAAGAGAGTTCTGACAATGCACACCAGTCCTCTGCAAGTTTGGATTGTGAAGAGATCAAAGAGAGATCAAACCATCTTGCTACTGTTTTGACTTCTGTTCAAGAAAATGCTCCCGGAAGTGAAAGTGAGTTGACATCGTCTGGGATCTGTAACTTACCTGTACCGAAACAAGGCAGTTCCAGAGAACAACCAGATGGTTTACAGGTAAATGACTTATCCATGAAGGAGAAGCAAGAACTAAATGATAATGGCCCTCCAGAAAAATTAGGAGCACCAATAAATCCTAAGCCTGAACCTGTTTCTGTCGGTGCTAGTGAAGCACCAGTTAAGCCTGTGCCTGCACCAATAGTGCCTGAATCTTCTTTGGAACATGATGTCAAAAGCAATGAAGATGGTATTTGTGATAAAGTAATTGTTTCTTGTAGCATGAGAAAACCTGCCTCTGATAGAATGAGCGTGGTGGATGGTGCCAGAGCCACAAATTCTAGCAATCCACAACTATCCAAAGCTCCAGTGAAGGAAGAAGACAATAGCCAAGTTTCTAATCACGCCGACGATAATTCAAATGGCTCTGATTCTTTTAATCATAGAAAAGATCCGACGAGCCCCAACATTATTGACAAGAGTTCTGACATGGAACTTGAGTATGGTATTGTAGATGCTTTAGATGTCGCTCGACAAGTTGCTCAGGAAGTTGATAGAAAATACACTACTCAAGTTTCTGATCAAGATGGTGACACCTCAAATAGTTTTGATTCCTTCAAACAGAGCAAAAGTTCCAGAAGCCCTAACATTGTCAACAAGAATTCTGACATTGAACTTGCGTATGGAATTGTTGATGCTTTACAAGTCGCTCGACAAGTTGCTCAGGAAGTTGAGAGAGAAATGAATAACTCTTCTTCAGAGAAAAGCTCAGAAGGTGGAATGAGGCTAGCTGGCAGCCCGGAATCTGTTGGCAAAAATGATGACCTTGCTTGTGCCCTACCCGAGGAGGTGTCATCCAGAAAAAGCAACTCCGCTGAAGCATGTCCTGAGGAGAGGCATATGAATGTTTCAGATGATATTGTCGCTGAGCCAGAATGCATCCCTGACTTGGAGTCCTCGCAGTTGACTGAAGCAGCTCAAGATCAAGGAGGTAATTCAGAGAAAAGCCTTTGCACCTTTGATCTTAATGAAGAATATGGTTCTGATGATATGAATGTTTCTGCAAATATGATATCTACAACACCAATACCTGTTGTCTCTGCTTCAAAACCTGCACAGACTTCAGGATTGCCAACAGCCCCTCTACAGTTTGAAGGCACACTTGGATGGAAAGGGTCGGCTGCCACCAGTGCCTTCCGTCCTGCATCACCTCGTAAAAATTCTGATAATCAGAAGAATGTTTCTGCTGGTGGGAACTCTGATATTTCCAAACAAAGGCAGGATTTTCTTGATTTTGATCTGAATGTGGCTGGGGGTGAAGAAGAAATGGTAAAACAGATTGGTGAGTCTTCAGGCTTGCCTTCTGGGCAATCATCAGTGGAACATAGCCCTAAAAGATCAAAGAGGTTTGAATTAGATTTGAACAGTATTGGTGATGATGGTGATACCCAACCTTCAGATCAGAGGATGGAGGGGCAGCTCTTCTTTGGAAGAAATGGCTATTGGAGCCCATCACCTGCATCATCATCGTCCTCAATGCAGCCTTCAGTTCGAAACATTGATTTGAATGATAGACCGTACTTTCAAACTGATTTTTTGGACCAAGGGCCTACTAAATCTTCTTCAAGTATTGAAGCATATGGACTTTCCAAATCAGACGCTCCTGCAATATCTATTTTGGGTGCCAAGGTGGAAGTCGGTAGAAGAGAACATGTCCCTCAAATTTGGTCTTTACCAAATGGCAAGGCTGTTGAGCCTGCAATAGATCTTACAATGATGTCAGGAGCTGGTAGCGTTTCAGGGATGGGACCTGCAGTATCCTACAATCATTCAGCTTTTTTGGGATATAATGGACTGACATCAATGCCCCCTTTGTCTTTTTCACCAGCCGCATATGGATCAGGTGGTACAATTCCATACATGGTGGACTCAAGAGGAGCTCCAGTTGTGCCTCAAGTTGGGGGATCATCTTCAACTGTCCTGTCATCGTACGCTCAGCCCCCATATATTATGAGCATGGCCGGTACACAGCTTGGTTTAAACAGTGTTGGACCTTCCCGTCCCAACCTCGATCTTAACTCGGGCTTCATGATTGATGGTGGGAATAGAGAAGCATTGGCTGCAAGGCCGTTTTTCTTTCCTGGTCAGAGCAGAGCTATGGAAGATAGGACCCTTCAACAATCCTCAAATTCAGGGGTCGGCGGGAAAAGAAAAGAACCGGATGGTAGCGGCTGGGAAACATATCCATACGGCTACAAACATCAGCAACCTTCGTGGAAGTAG 3078 0.435 MTLEDFFTLTEMKDGLTTPSRVQELVSVMKKEQDSVVKNAGDVMRQWAAVASTIAATESKDCLDLFIQLDGPRFIDRWLNDAKKIGAGTNDSVMEESIIAMLRAVEKLYLDSEKPISSGIRATVSNFLAHHSSKVQDSARVLFGKWKGVGNGDAESHDMDTGQRNHMIDKNLKEEGQLSSVNGANNDNDHVLRLEGGEKSILRSSDTQIPDKAANVKKESSDNAHQSSASLDCEEIKERSNHLATVLTSVQENAPGSESELTSSGICNLPVPKQGSSREQPDGLQVNDLSMKEKQELNDNGPPEKLGAPINPKPEPVSVGASEAPVKPVPAPIVPESSLEHDVKSNEDGICDKVIVSCSMRKPASDRMSVVDGARATNSSNPQLSKAPVKEEDNSQVSNHADDNSNGSDSFNHRKDPTSPNIIDKSSDMELEYGIVDALDVARQVAQEVDRKYTTQVSDQDGDTSNSFDSFKQSKSSRSPNIVNKNSDIELAYGIVDALQVARQVAQEVEREMNNSSSEKSSEGGMRLAGSPESVGKNDDLACALPEEVSSRKSNSAEACPEERHMNVSDDIVAEPECIPDLESSQLTEAAQDQGGNSEKSLCTFDLNEEYGSDDMNVSANMISTTPIPVVSASKPAQTSGLPTAPLQFEGTLGWKGSAATSAFRPASPRKNSDNQKNVSAGGNSDISKQRQDFLDFDLNVAGGEEEMVKQIGESSGLPSGQSSVEHSPKRSKRFELDLNSIGDDGDTQPSDQRMEGQLFFGRNGYWSPSPASSSSSMQPSVRNIDLNDRPYFQTDFLDQGPTKSSSSIEAYGLSKSDAPAISILGAKVEVGRREHVPQIWSLPNGKAVEPAIDLTMMSGAGSVSGMGPAVSYNHSAFLGYNGLTSMPPLSFSPAAYGSGGTIPYMVDSRGAPVVPQVGGSSSTVLSSYAQPPYIMSMAGTQLGLNSVGPSRPNLDLNSGFMIDGGNREALAARPFFFPGQSRAMEDRTLQQSSNSGVGGKRKEPDGSGWETYPYGYKHQQPSWK* 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g6099 1025 PANTHER TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN 1 393 - -
Mal1g6099 1025 PANTHER TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN 456 1025 - -
Mal1g6099 1025 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 61 157 IPR035441 -
Mal1g6099 1025 MobiDBLite consensus disorder prediction 510 536 - -
Mal1g6099 1025 PANTHER TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN-RELATED 456 1025 - -
Mal1g6099 1025 PANTHER TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN-RELATED 390 451 - -
Mal1g6099 1025 ProSiteProfiles TFIIS N-terminal domain profile. 73 153 IPR017923 -
Mal1g6099 1025 MobiDBLite consensus disorder prediction 660 691 - -
Mal1g6099 1025 MobiDBLite consensus disorder prediction 982 1025 - -
Mal1g6099 1025 MobiDBLite consensus disorder prediction 199 235 - -
Mal1g6099 1025 MobiDBLite consensus disorder prediction 713 752 - -
Mal1g6099 1025 MobiDBLite consensus disorder prediction 372 392 - -
Mal1g6099 1025 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 17 151 IPR035441 -
Mal1g6099 1025 MobiDBLite consensus disorder prediction 453 482 - -
Mal1g6099 1025 MobiDBLite consensus disorder prediction 399 425 - -
Mal1g6099 1025 PANTHER TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN 390 451 - -
Mal1g6099 1025 MobiDBLite consensus disorder prediction 727 741 - -
Mal1g6099 1025 MobiDBLite consensus disorder prediction 665 690 - -
Mal1g6099 1025 MobiDBLite consensus disorder prediction 252 283 - -
Mal1g6099 1025 PANTHER TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN-RELATED 1 393 - -
Mal1g6099 1025 MobiDBLite consensus disorder prediction 362 426 - -
Mal1g6099 1025 MobiDBLite consensus disorder prediction 295 345 - -
Mal1g6099 1025 MobiDBLite consensus disorder prediction 985 999 - -
Mal1g6099 1025 Coils Coil 499 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g6099 Mal-Chr1 139886075 139889152 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g6099 - - lja:Lj5g3v0238160.2 1342.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g6099 1 139886075 139889152 Mal1g6099 1 139886075 139889152 ECH