Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g6083 ATGGATCACCACCACCAAGCATTATCAATTTTTTCATTCTTATTAGCACTTCATCTATCAATTTCAGGTGTAATTTCAACAACATTCACATTTGTTAACAAATGTGACTACACAGTGTGGCCAGGGATTCTTTCAAATGCTGGGGTCCCAACACTTCCAACCACCGGCTTCGTTCTCCAAACCGGTGAAACCACCACCGTTGCCGCACCCGCATCATGGGGCGGCCGTTTCTGGGGCAGAACTCTTTGCTCCCAAGACACCACTGGAAAATTCTCATGCATTACCGGCGATTGTGGCTCCGGTAAGCTGGAATGCTCTGGTAACGGAGCCACACCGCCGGCAACTTTAGCCGAATTCACATTAGATGGCTCCGGTGGTCTTGACTTCTTCGACGTTAGTCTTGTCGATGGTTACAATGTGCCTATGCTTGTCACCCCTCAGGGTGGCTCCGGCGATAATTGCACCACCACGGGATGTATCAGTGATCTCAACGGCGCGTGTCCTTCAGAGCTTAGAGTTATGAGTGTGGATGGGAAAGAGGGTGTCGCGTGTAAAAGCGCGTGTGAGGCTTTTAATTCGCCGGAGTATTGTTGCAGCGGCGCGTATGGAACACCGGATACATGCAAACCTTCTACTTATTCTCAATTGTTTAAGAACGCTTGCCCACGTGCGTATAGCTATGCTTATGATGATAAAACAAGTACTTTCACTTGTGCAAATGCAGTAGATTATACTATAACCTTTTGTTCTTCTCCTACCACAAGTCAGAAGGCAACACAAGGGCAAGACGCAAAACAAGAAAGTCCTTCTAACTCTGCCTCACCTCAGCTTAACAACGACAACACAATGGTGTATGAAGGTGGTATTATTGATCAAAGTGAAATCTCAAAAGCCATGTGCACCCATGTGCTCCAATCACAAACTATTGCGTGCATTATTAGCATCACTATAGTCATTTGGCAGTTATGCCAACTCTTCTAA 981 0.4628 MDHHHQALSIFSFLLALHLSISGVISTTFTFVNKCDYTVWPGILSNAGVPTLPTTGFVLQTGETTTVAAPASWGGRFWGRTLCSQDTTGKFSCITGDCGSGKLECSGNGATPPATLAEFTLDGSGGLDFFDVSLVDGYNVPMLVTPQGGSGDNCTTTGCISDLNGACPSELRVMSVDGKEGVACKSACEAFNSPEYCCSGAYGTPDTCKPSTYSQLFKNACPRAYSYAYDDKTSTFTCANAVDYTITFCSSPTTSQKATQGQDAKQESPSNSASPQLNNDNTMVYEGGIIDQSEISKAMCTHVLQSQTIACIISITIVIWQLCQLF* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g6083 326 PANTHER BNAA02G17480D PROTEIN 13 277 - -
Mal1g6083 326 PRINTS Pathogenesis-related protein signature 76 87 IPR001938 -
Mal1g6083 326 PRINTS Pathogenesis-related protein signature 240 249 IPR001938 -
Mal1g6083 326 PRINTS Pathogenesis-related protein signature 28 40 IPR001938 -
Mal1g6083 326 PRINTS Pathogenesis-related protein signature 128 144 IPR001938 -
Mal1g6083 326 ProSiteProfiles Thaumatin family profile. 26 249 IPR001938 -
Mal1g6083 326 PANTHER OS03G0233200 PROTEIN 13 277 IPR001938 -
Mal1g6083 326 MobiDBLite consensus disorder prediction 259 280 - -
Mal1g6083 326 SUPERFAMILY Osmotin, thaumatin-like protein 27 250 IPR037176 -
Mal1g6083 326 CDD TLP-PA 28 249 - -
Mal1g6083 326 ProSitePatterns Thaumatin family signature. 89 105 IPR017949 -
Mal1g6083 326 SMART tha2 29 250 IPR001938 -
Mal1g6083 326 Gene3D Thaumatin 27 250 IPR037176 -
Mal1g6083 326 PIRSF PR5 1 288 IPR001938 -
Mal1g6083 326 Pfam Thaumatin family 33 249 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g6083 Mal-Chr1 139482854 139484785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g6083 13 268 Receptor kinase-like Gene Family AT5G38280 53.817 1.61e-97 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g6083 - - gmx:100787631 530.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g6083 1 139482854 139484785 Mal1g6083 1 139482854 139484785 ECH