Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5936 ATGGGAACCCTAGGAAGAGCAATATACAGCGTTGGATTTTGGATTCGAGAAACTGGACAAGCCATTGATCGCCTCGGTTCTCGCCTCCAAGGAAATTACTACTTCCAAGAACAGCTGTCTAGGCATCGAACTTTGATGAACATATTTGATAAGGCTCCTGTTGTTGATAAAGATGCATTTATTGCCCCAAGTGCCTCCGTCATCGGTGATGTTCACATTGGCAGAGGATCATCCATTTGGTATGGATGTGTCATGAGAGGTGACGTGAACAACATTAGTGTTGGAAGTGGAACCAACATTCAGGATAACTCCTTGGTGCACGTTGCAAAGTCAAATTTAAGTGGGAAGGTGTTGCCTACCATTATTGGGGATAATGTTACTGTAGGTCATAGTGCGGTCTTACATGGTTGCACTGTTGAGGATGAGGCTTTTGTTGGAATGGGTGCAACACTACTGGATGGTGTTGTTGTTGAGAAACATGCCATGGTTGCTGCTGGTGCTCTTGTGAGACAGAATTCGCGGATTCCATCTGGAGAGGTTTGGGCAGGCAATCCAGCAAAGTTCCTGAGGAAGCTCACTGCTGAAGAGATATCATTTATCTCCCAGTCAGCCATCAATTACAGTAACCTTGCACAGGTCCATGCAGCTGAAAATGCCAAGCCTTTTGATGAAATTGAGTTTGAGAAGGTGCTCCGAAAGAAGTTTGCGCGAAAAGACGAGGAGTATGACTCAATGTTGGGCGTTGTTCGTGAGATCCCTCCAGAACTCATTCTTCCAGATAATGTCCTACCTAAACAAACAAAGGTTTCTGCACAATGA 819 0.4505 MGTLGRAIYSVGFWIRETGQAIDRLGSRLQGNYYFQEQLSRHRTLMNIFDKAPVVDKDAFIAPSASVIGDVHIGRGSSIWYGCVMRGDVNNISVGSGTNIQDNSLVHVAKSNLSGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVEKHAMVAAGALVRQNSRIPSGEVWAGNPAKFLRKLTAEEISFISQSAINYSNLAQVHAAENAKPFDEIEFEKVLRKKFARKDEEYDSMLGVVREIPPELILPDNVLPKQTKVSAQ* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5936 272 Gene3D Hexapeptide repeat proteins 43 222 - -
Mal1g5936 272 PANTHER DYNACTIN SUBUNIT P25 1 267 - -
Mal1g5936 272 CDD LbH_gamma_CA_like 54 212 - -
Mal1g5936 272 PANTHER YRDA, PUTATIVE-RELATED 1 267 - -
Mal1g5936 272 Pfam Hexapeptide repeat of succinyl-transferase 119 151 IPR001451 -
Mal1g5936 272 SUPERFAMILY Trimeric LpxA-like enzymes 47 212 IPR011004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5936 Mal-Chr1 137109497 137114495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5936 121 199 Miscellaneous Gene Families AT2G17640 34.091 3.79e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5936 K01726 - pop:7471944 498.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5936 1 137109497 137114495 Mal1g5936 1 137109497 137114495 ECH