Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5913 ATGCCATTCTCATCAGTCCCAGCTCGTCTCACACTCCTCGCTCTCTTCTCCGCCACAACTTTCTACTTCTTCTACAAATCTCGCCGCTTACGAAGCCTCAAATTACTAACCGTAAACTCTCCAAACCCTAACCCTAACCCTAACCCTAAAATCCTCTTCATTTCTCAAACTGGAACTTCCAAAACCCTCGCTAACCGTCTCCACCGTTTCCTCTCCTCAAACAACCTCACATTCGACCTCATCGATGGCAAAAACTACGAACCCGAAGATCTCCCCAAGGAAACTCTCCTTCTCATTGTCGCTTCCACTTGGGAAGATGGAAAACCACCGCCGGAATATAGATTCTTCGCTGATTGGCTCGCGGAGAGTTCTGAAGATTTTAGAGTTGGTTCTTTGATTCTGTCCAAGTGTAGATTTGCGGTATTCGGTGTTGGTAGTGGAGGTAATGAGATGGTGCCGTTGTGGGAAGGGGATGTTGATGGTGGTGAGGTGGATGTGGTTTTTGAGAAGTGGTGTGGGAAATTGGTTGGATTGTTGAAAGATGGTGGTGGTGATTTGGAGAATGGGGAGGAGGAATATGGTGTTGTGAGTTCTGATGAAGAGACTGATGAGGAGGAAGAGGTGGAATCGGATATTGTTGATCTTGAAGACATTGCCGGTAAAGCTCCTTCGAGGAAATCCGTGGCTACGGTGAAGGAGACTAATGGCAAGTTGAATGGAAAGAAAGAAATGGTGACTCCTGTCATAAGAGCAAATTTGGTGAAGCAGGGTTATAAGATTATTGGTTCACATAGTGGTGTCAAGATTTGTAGATGGACTAAGTCTCAGCTTCGAGGTCGAGGTGGTTGCTACAAGCATTCATTTTATGGAATTGAGAGTCACAGGTGCATGGAGGCAACCCCTAGCTTGGCATGTGCAAATAAATGTGTTTTCTGCTGGAGGCACCACACAAATCCAGTAGCAAAAAGTTGGGTGTGGGAGATGGACGATCCTATAGAGATTGTAAATTCTGCAATAGAGCAGCATACAAATATGATTAAACAAATGAAAGGAGTTCCTGGAGTCACCTTGGAGCGATTAAATGAAGGCTTCACACCGCGGCATTGTGCATTATCTCTTGTTGGTGAACCTATTATGTATCCAGAGATAAATACACTTGTGGATGAGTTGCACAAAAGGAGGATTTCCACTTTTCTAGTTACAAATGCACAATTTCCAGAGAAAATCAAGTTGCTGAAGCCTATCACCCAGTTATACGTCAGTGTAGATGCCGGAACAAAGGACTCTCTAAAGGCAATTGATAGACCACTCTTTGGAGATTTCTGGGAAAGATTTATTGATTCCTTGACTGCTTTGAAGGAAAAACACCAGCGTACTGTATACCGCCTGACCCTTGTGAAAGGATGGAATACTGAAGATATTGATGCTTATTATAATCTCTTTAGTATTGGAGAACCAGACTTCATTGAAATCAAGGGTGTCACATATTGTGGCTCGACCGCTACTTCAAAATTGACAATGGAAAATGTACCTTGGCATGCCGACGTGAAAGCTTTCTCAGAGGCTCTGTCTCTGAAAAGCCAAGGGGAGTATGAAGTTGCCTGTGAGCATGTTCACTCGTGTTGCGTCCTCTTAGCAAAAACTAAAAAGTTCAAAATTGATGGCCAGTGGTATACATGGATAGACTATGAGAAATTTCATGATCTGGTGGCTTCTGGAAGTACTTTTGACAGCAAAGATTACATGGCTGCGACACCATCCTGGGCAGTCTATGGAGCTGAGGAAGGTGGATTTGATCCAGGACAATTGAGATATAGGAAAGAGAGACATCACAAGTCGAGCCGCAAAGTATCAGGTTAG 1860 0.4398 MPFSSVPARLTLLALFSATTFYFFYKSRRLRSLKLLTVNSPNPNPNPNPKILFISQTGTSKTLANRLHRFLSSNNLTFDLIDGKNYEPEDLPKETLLLIVASTWEDGKPPPEYRFFADWLAESSEDFRVGSLILSKCRFAVFGVGSGGNEMVPLWEGDVDGGEVDVVFEKWCGKLVGLLKDGGGDLENGEEEYGVVSSDEETDEEEEVESDIVDLEDIAGKAPSRKSVATVKETNGKLNGKKEMVTPVIRANLVKQGYKIIGSHSGVKICRWTKSQLRGRGGCYKHSFYGIESHRCMEATPSLACANKCVFCWRHHTNPVAKSWVWEMDDPIEIVNSAIEQHTNMIKQMKGVPGVTLERLNEGFTPRHCALSLVGEPIMYPEINTLVDELHKRRISTFLVTNAQFPEKIKLLKPITQLYVSVDAGTKDSLKAIDRPLFGDFWERFIDSLTALKEKHQRTVYRLTLVKGWNTEDIDAYYNLFSIGEPDFIEIKGVTYCGSTATSKLTMENVPWHADVKAFSEALSLKSQGEYEVACEHVHSCCVLLAKTKKFKIDGQWYTWIDYEKFHDLVASGSTFDSKDYMAATPSWAVYGAEEGGFDPGQLRYRKERHHKSSRKVSG* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5913 619 ProSiteProfiles Radical SAM core domain profile. 289 532 IPR007197 GO:0003824|GO:0051536
Mal1g5913 619 Pfam Radical SAM superfamily 301 480 IPR007197 GO:0003824|GO:0051536
Mal1g5913 619 SUPERFAMILY Radical SAM enzymes 302 482 - -
Mal1g5913 619 SFLD tRNA wybutosine-synthesizing 240 551 IPR034556 GO:0008033|GO:0051539
Mal1g5913 619 ProSiteProfiles Flavodoxin-like domain profile. 49 216 IPR008254 GO:0010181
Mal1g5913 619 PRINTS Flavodoxin signature 136 146 IPR001094 GO:0010181
Mal1g5913 619 PRINTS Flavodoxin signature 98 109 IPR001094 GO:0010181
Mal1g5913 619 PRINTS Flavodoxin signature 50 63 IPR001094 GO:0010181
Mal1g5913 619 Gene3D Aldolase class I 226 559 IPR013785 -
Mal1g5913 619 CDD Radical_SAM 301 501 - -
Mal1g5913 619 SUPERFAMILY Flavoproteins 48 180 IPR029039 -
Mal1g5913 619 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT TRNA 4-DEMETHYLWYOSINE SYNTHASE 3 613 IPR034556 GO:0008033|GO:0051539
Mal1g5913 619 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT TRNA 4-DEMETHYLWYOSINE SYNTHASE 3 613 - -
Mal1g5913 619 Gene3D - 42 183 IPR029039 -
Mal1g5913 619 SFLD tRNA wybutosine-synthesizing 240 551 - -
Mal1g5913 619 Pfam Wyosine base formation 484 547 IPR013917 -
Mal1g5913 619 Pfam Flavodoxin 51 157 IPR008254 GO:0010181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5913 K15449 - gmx:100791920 977.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5913 1 136908249 136914136 Mal1g5913 1 136908249 136914136 ECH