Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5892 ATGGCGGGTCGCAGAGATGCGTTACTGACCAGAGATAAGAGTCATTCAATCACCGCATCTCGAATCGCCGTTGCCGTTTTCGTTGGTGTTCTTCTTGGTTGCATCTTCGCTTTCTTCTCTCCTCATGGTATCTTCATTTCCACCGCCTCAACCACTTCCATTCTCACCCACAAGATGGTTTCGACAGAGTGCGAATCACCGGAACAAGTTAATGCGTTGAAATTAAATATTCAATCAGCTAAAGAGAAGAATTCTGAGCTGAAGAAGGAGGTGAAAGGGTTAATGGAAAGGCTTCGTTTGGCAGAGGAGGGAAAGGGTCATGCAAGGGAACAATTTGTTGTGCTTGGTGAGAAACACAAGGCTGGTCCTTTCGGTACTGTCAAGGCTCTTAGAACAAACCCTCCTGTTATTCCCGATGAATCAGTGAACCCTAGATTAGCCAAACTCCTAGAAGAAGTTGCTATTTATAAAGAGGTTGTTGTTGTTCTGGCAAACACTAATGTGTTGGAGATGTTGCAAGTTTGGTTCACCAATATCAAGAGGGTTGGCATTACTAATTATTTAGTTGTTGCGTTGGATGACAGAATTGAAGAGTTTTGTAAGTCGAATGATGTTCCTGTCTATAGAAGAGACCCAGATCAAGGAGTTGATTCAATTGCCAAGTCAGGTGGGAACCATGCTGTTTCCGGACTGAAATTTCGCATTTTGAGAGAGTTTCTGCAATTGGGTTACAGTGTTCTCCTCTCGGATGTCGATATTGTGTATTTGCAGAACCCCTTTGATTATATTTATAGGGATTCAGATGTGGAGTCAATGTCGGATGGTCATAATAATCATACGGCTTATGGATTTAACGATGTCTTTGATGAACCTTCAATGGGTTGGGCTAGATATGCTCATACAATGAGAATATGGGTTTATAACTCTGGCTTTTTTTACATAAGACCTACACTTCCTTCAATTGAGCTTTTGGATCGCGTTGCCAACCGGCTTTCTAAAGAGAAAGCATGGGATCAAGCCGTTTTTAATGAAGAACTCTTTTACCCTTCAAACCCTGGTTATGATGGACTTCATGCTGCAAAGAGAACAATGGATATGTACCTTTTTATGAACAGTAAGGTTCTGTTTAAGACTGTGAGAAAAGATGCTAAACTCAAGAAGTTGAAGCCTGTGATTGTACATGTTAACTATCATCCTGATAAACTTGCGAGGATGAAAGCTGTAGTTGAGTTCTATGTCAACGGGAAACAAGATGCGCTCGACAGTTTCCCAGATGGTTCTGATTAG 1287 0.4165 MAGRRDALLTRDKSHSITASRIAVAVFVGVLLGCIFAFFSPHGIFISTASTTSILTHKMVSTECESPEQVNALKLNIQSAKEKNSELKKEVKGLMERLRLAEEGKGHAREQFVVLGEKHKAGPFGTVKALRTNPPVIPDESVNPRLAKLLEEVAIYKEVVVVLANTNVLEMLQVWFTNIKRVGITNYLVVALDDRIEEFCKSNDVPVYRRDPDQGVDSIAKSGGNHAVSGLKFRILREFLQLGYSVLLSDVDIVYLQNPFDYIYRDSDVESMSDGHNNHTAYGFNDVFDEPSMGWARYAHTMRIWVYNSGFFYIRPTLPSIELLDRVANRLSKEKAWDQAVFNEELFYPSNPGYDGLHAAKRTMDMYLFMNSKVLFKTVRKDAKLKKLKPVIVHVNYHPDKLARMKAVVEFYVNGKQDALDSFPDGSD* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5892 428 Pfam Nucleotide-diphospho-sugar transferase 184 405 IPR005069 -
Mal1g5892 428 SUPERFAMILY Nucleotide-diphospho-sugar transferases 160 367 IPR029044 -
Mal1g5892 428 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 34 - -
Mal1g5892 428 PANTHER GLYCOSYLTRANSFERASE 1 428 - -
Mal1g5892 428 Coils Coil 70 104 - -
Mal1g5892 428 PANTHER ARABINOSYLTRANSFERASE RRA3 1 428 IPR044290 GO:0016757|GO:0080147
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5892 Mal-Chr1 136605002 136607142 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5892 K20783 - gmx:100804935 719.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5892 1 136605002 136607142 Mal1g5892 1 136605002 136607142 ECH