Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5791 ATGCCTTGTATTGTTACCAAATCAACGATTCTTCCTCAGACACAACACAAGAACATGTCTCAAGAACTAATCGACGCCGGGAAAAAAATTATGGAAATATTGGAAAACGCAGATATCAATAAGGATGGTTGTTATACAAAGGATGAAATCAAGAAAGCTTTAAAAGATTTAGGTTCTTACATCCCAGGATGGAGAGCCAAACGTTGTCTCAAGAAACTTGATGCCAACAATGATGGCCAAATTAGTGGTGATGAAATTGATAATTTAGTTGATTATCTCCTTGCCCAAGGTTTTGGAAAGAAGTCAAAGAAAACAACTAATTAG 324 0.358 MPCIVTKSTILPQTQHKNMSQELIDAGKKIMEILENADINKDGCYTKDEIKKALKDLGSYIPGWRAKRCLKKLDANNDGQISGDEIDNLVDYLLAQGFGKKSKKTTN* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5791 107 SUPERFAMILY EF-hand 10 89 IPR011992 -
Mal1g5791 107 ProSiteProfiles EF-hand calcium-binding domain profile. 25 60 IPR002048 GO:0005509
Mal1g5791 107 ProSitePatterns EF-hand calcium-binding domain. 74 86 IPR018247 -
Mal1g5791 107 ProSiteProfiles EF-hand calcium-binding domain profile. 65 96 IPR002048 GO:0005509
Mal1g5791 107 Gene3D - 6 97 - -
Mal1g5791 107 SMART efh_1 29 57 IPR002048 GO:0005509
Mal1g5791 107 SMART efh_1 65 93 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5791 Mal-Chr1 135146953 135147276 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5791 33 89 EF-hand Containing Proteins AT2G43290 38.596 6.54e-07 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5791 - - mtr:MTR_1g019660 112.849