Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5720 ATGCAGAGATCACTATGGTTGCCATTGTCATCTCCTACAATGGTTCTTCCAATTCCAATTCCAACTCAATCTCACTCTATTGGATGGCAAGAAACTTGGGCGTTCTTTCTTGCTACTCTCTCCATTTATTTTTGTGTTTCAGCTAGTCTTTTATATGGCTTTTATGGCGATTCTCGTTTGATTCTTGGTCCAAGCTCATCGCGTTTGATAAAAGCAAATTCGATTTTTGTCGAGCAAATTGAAGTAACAAATAAGTATACTAATAATAAAGATGATATTCATCTTTATTCTTTCAATGAGAAACCAGAGTTAAGTTCTCAAATAAATTGGACTACATCAAAGTTTTTAGTTGTTGATGCATATAGTCGCAAGGGAATTTCTTTGTGGTTAAATAAAGGCTCCACTATCTATTTGAAGTGGGAAGCAGAGGCTAGTAATCTTGAAGGGATAGTGATTAAAGGAGAAAAGAGGTTAGAAACACTAAAGCCTAAACAAACGACTCTTCATGAGGCAATGCCAATTTCTGTTAGGGAGAATGACAATGGTAAACGAGCTGAATACATTGTTGAGGAAGATGATAAATACCAAATTGGGATTCTAAACATGAATGCTAGGAACATAATCTTGACTATGAATATCAATGTTTCTGCAAAGATATATGATACTACGAAAGCCACGAATATGTGTTCTACTCGGAGTGGATCGTGCAAACTTGACCTTTCTTTCCCTATAACATATTATTTAGTTCTAACAGCACCAAAAAATGGAAACGATGATGATGCGTGGATTGTTGAAATTTCTTTTATGGCTCGTGTTTTTTCCTACATAATTCTTTTAGGAATTTTCATGATTGTGATTTTTCTGATATTGAAATGTCTTGGAGCTGGTGGTGATGGTGAAAATAACAATGTAGTTGAAGCGCGAGAAGTAACTGAAACAGAACCCCTGATGCAGCCAAATCCAGTGACATACGGAACACTCAAATTTCATGAAAAGGAAGGGTCAGATTCAGATGTTTCAAGTAGCTCTTCAGAGGAATTATATAATGAAAAATTATGCATAGTTTGTTATGATGAACAACGCAACTGTTTCTTCGTTCCTTGTGGTCATTGTGCCACTTGCTATGACTGTGCACAAAGGATTGTGAATGGGGAGAGCAAAGTTTGTCCTGTATGCCGGAGACTTATTCATAGAGTAAGAAGATTATTCAACAGTTAG 1218 0.3621 MQRSLWLPLSSPTMVLPIPIPTQSHSIGWQETWAFFLATLSIYFCVSASLLYGFYGDSRLILGPSSSRLIKANSIFVEQIEVTNKYTNNKDDIHLYSFNEKPELSSQINWTTSKFLVVDAYSRKGISLWLNKGSTIYLKWEAEASNLEGIVIKGEKRLETLKPKQTTLHEAMPISVRENDNGKRAEYIVEEDDKYQIGILNMNARNIILTMNINVSAKIYDTTKATNMCSTRSGSCKLDLSFPITYYLVLTAPKNGNDDDAWIVEISFMARVFSYIILLGIFMIVIFLILKCLGAGGDGENNNVVEAREVTETEPLMQPNPVTYGTLKFHEKEGSDSDVSSSSSEELYNEKLCIVCYDEQRNCFFVPCGHCATCYDCAQRIVNGESKVCPVCRRLIHRVRRLFNS* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5720 405 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 329 405 IPR013083 -
Mal1g5720 405 Pfam Domain of unknown function (DUF4793) 185 288 IPR032010 -
Mal1g5720 405 SUPERFAMILY RING/U-box 344 399 - -
Mal1g5720 405 Pfam Domain of unknown function (DUF4792) 94 158 IPR032008 -
Mal1g5720 405 PANTHER OS05G0521000 PROTEIN 26 404 IPR044586 GO:0004842
Mal1g5720 405 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 26 404 - -
Mal1g5720 405 Pfam Zinc finger, C3HC4 type (RING finger) 350 399 - -
Mal1g5720 405 ProSiteProfiles Zinc finger RING-type profile. 353 393 IPR001841 -
Mal1g5720 405 SMART ring_2 353 392 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5720 Mal-Chr1 133951998 133953929 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5720 - - cam:101496542 579.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5720 1 133951998 133953929 Mal1g5720 1 133951998 133953929 ECH