Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5578 ATGACCTTCATGTTCTCCACCTTACCTTCTTGCTTCCGCCCATCAAAAACCACCGACCACCACCCTCCGCCGTCTCATCCCAATCTCACAACCTACATATACCAAACAAACGCCGGCACAATTTCCTTAACATGGTCAAGTTCCATTTTGGGTCACACTTTTCAAATTCATCTTCACAATAACTCTTCCTCTTTCAACCTTCACATAAAACCCTTCCATTTCTTCAACAAAAACGGATCAAAGAAACTCTCTCACAATACTCTTCTCTTATGGAACCTCTCCAAAGCTAGGTTCGGGTCCAAATCACCGGAACCCGAACGTAACTCCAAATTCTATATAGCTTTAGTTGTTGAAAACGAACTCGTTCTTTTTGTAAACAACAACATGGAACATGCACGTGCTAATAAGTTCTTGAGAGCACATGATGAAACAAAGATTCCTCAAATTCTTGTTCTAAAAAAGGAACACGTGGACATGGATATAAATAGAAATGGATCATCATCATATGCTACGAAAACGAGGTTTGGTGGGAAAGTTAGAGAGATTGAGATAGAGATAGATTGTGATTGTGATGATGATGATGATGATGATGATGATGGAAATAGTACGAGATTGTTGTTTAGTGTTGATGGGGAAAGGGTTTTGGAGTTGAGGAAATTGAAGTGGAAATTTAGAGGGAATGAGAGAGTGGAAATTGATGGAGTTTGTGTTTTGATATGTTGGGATTTGCACGGTTGGGTTTTTGAAAATGGTGGTGATGAGCATGCGGTTTTTATGTTCAAGTTTGAGGAAAACGAGGTACGAGGTTGTTGTGGGAAAGAGAGTGTGTTGGGGTCTTGTTGCAAGAGTTGGTCGTCTTCTTCTATTTCAATGTCGTCTAATTCTGTTGGTGGAAGTAGCTCTGTTATGGAATGGTGTAATTTTGAGGAGAGTGAGGTAGTTGTTCCTCTTGGGTTTTCTTTGCTTGTTTATGCTTGGAAAAAAGGGTGA 990 0.401 MTFMFSTLPSCFRPSKTTDHHPPPSHPNLTTYIYQTNAGTISLTWSSSILGHTFQIHLHNNSSSFNLHIKPFHFFNKNGSKKLSHNTLLLWNLSKARFGSKSPEPERNSKFYIALVVENELVLFVNNNMEHARANKFLRAHDETKIPQILVLKKEHVDMDINRNGSSSYATKTRFGGKVREIEIEIDCDCDDDDDDDDDGNSTRLLFSVDGERVLELRKLKWKFRGNERVEIDGVCVLICWDLHGWVFENGGDEHAVFMFKFEENEVRGCCGKESVLGSCCKSWSSSSISMSSNSVGGSSSVMEWCNFEESEVVVPLGFSLLVYAWKKG* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5578 329 Pfam Plant protein of unknown function (DUF868) 26 327 IPR008586 -
Mal1g5578 329 PANTHER EXPRESSED PROTEIN 6 267 IPR008586 -
Mal1g5578 329 PANTHER OS08G0422401 PROTEIN 6 267 - -
Mal1g5578 329 PANTHER OS08G0422401 PROTEIN 277 328 - -
Mal1g5578 329 PANTHER EXPRESSED PROTEIN 277 328 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5578 Mal-Chr1 131397012 131398001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5578 28 327 EF-hand Containing Proteins AT3G04860 30.323 4.43e-34 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5578 - - gmx:100806546 279.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5578 1 131397012 131398001 Mal2g0932 2 10825512 10826546 PCT