Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5570 ATGGAACCAGAAGTAAGCATAGAAGGTTCCTCCACCATCCAAATCGCCGTAATCCCAATCGGACCAATCCCACCACCACTCCTCCGCGACTACTACTCTCTCCTCCTTCCACTCCACACCATCCCTCTCTCTTCCACCACTCCCTTCTACACATCCCTCCAAAAATCCCCCTTCGCTCATCAACCTTGGGATTCCGGTTCCCTCCGCTTCAAATTCGTCCTCGGCGGTGCTACTCCTAGTCCCTGGGAGGATTTTCAATCGCATCGGAAAACTCTTGCTGTTGTTGGCATTGTTCATTGTCCTTCCTCCCCGGATCTCAATGATGTTGTTGATCAGTTCGCCAGTTCGTGTAAATCTTATCCTTCTTCGCTTGCTGATCGGTGTTTCGCTTTTTACCCTAATGATTCTCAGCTTGAGGATGGAAGTAAGAGAGGTGGAAATTTGAGGTTGTTTCCACCTGCAGATCGTGCTACGTTAGAGTTTCATTTGAATACTATGATGCAAGAAGTAGCTGCTTCGTTGCTAATGGAGTTTGAGAAGTGGGTGCTTCAAGCAGAATCGTCTGGAACTATTCTCAAGACGCCTTTGGATTCTCAAGCTAGTCTCAGCTCAGAGGAGGTTATCAAGGCAAAAAAGAGGAGACTTGGGCGTGCTCAGAAGACCATTGGTGACTACTGCTTGCTGGCAGGCTCTCCAGTTGATGCTAATGCTCATTATTCTACTGCATTAGAACTTGGCAGGTTGACTGGGGATTACTTCTGGTATGCTGGTGCATTGGAGGGTAGCGTTTGTGCCTTGCTGATTGACCGTATGGGCCAGAAAGATTCAGTCTTGGAGGATGAAGTTAGATATCGTTATAATAGTGTCATCTTGAATTACAAGAAGTCACAAGATAATACTCAGCGGGTTTCTCCCATAACTTTTGAACTTGAAGCTACTTTGAAATTAGCAAGGTTCCTTTGCAGGCGAGAGCTGGCCAAGGAGGTGGTGGAGTTGTTAACCACAGCTGCAGATGGTGCTAAATCTTTAATTGATGCAAGTGACAGACTCATATTATACATTGAAATAGCTCGTTTGTATGGTAGTCTTGGATACCAGAGGAAAGCCGCTTTCTTTTCAAGGCAGGTTGCTCAGTTATATTTGCAGCAAGAAAATAGGCTGGCTGCAATTAGTGCTATGCAAGTTTTGGCAATGACCACAAAAGCTTATCATGTTCAAAGTAGATCATCAATTTCCGATCATTCTAATCAAAATAAGGGAAGTGGATCAGATAAAGCTGATGGTGGTAAAATATATCACCAATCAGTTGTGTCATTGTTTGAGTCTCAATGGAGTACCATCCAAATGGTTGTATTAAGAGAAATTCTGCTCTCTGCAGTTCGTGCCGGAGATCCTCTGACTGCATGGAGTGCAGCGGCACGACTCCTTAGGTCCTACTATCCTCTAATAACTCCTGCTGGGCAAAATGGTCTTGCTAATGCACTTTCGAATTCTTCTGAGAGGCTACCACCAGGGACTCGTTGCGCCGATCCCGCTTTACCTTTTATAAGGGTGCATTCCTTTCCTGTCCACCCAACACAAATGGACATTGTAAAACGTAATCCTGCTAGAGAAGACTGGTGGGTGGGTTCTGCTCCTTCAGGCCCTTTCATTTACACGCCATTTAGTAAAGGAGATCCAAATAATATCAAGAAGCAAGATCTTATTTGGATTGTTGGAGAGCCGATCCAGGTTTTAGTGGAATTGGCAAACCCGTGTGGCTTTGATTTAAGAGTGGATAGCATTTATCTGTCTGTGCATTCAGGAAATTTTGATGCTTTTCCTGTGAGCATAAGCCTTCTACCAAATTCTTCAAAAGTGATTACCTTATCTGGCATTCCAACATCAGTGGGGCCAGTTACAATTCCTGGGTGCATCGTTCATTGTTTTGGTGTTATTACTGAACACCTGTTTAAAGAGGTTGACAATCTGCTTCTTGGGGCCGCACAAGGGCTTGTCCTTTCTGACCCTTTCCGATGTTGTGGATCTCCAAAGTTGAAGAATGTATCTGTTCCAAGTATTTCTGTAGTACCACCACTTCCATTGCTGATATCACATGTTGTTGGAGGTGATGGGGCCATCATTTTGTATGAAGGCGAAATTCGTAATGTGTGGATAAGTCTGGCTAATGCAGGCACAGTTCCAATTGAGCAGGCGCATATTTCATTGTCAGGGAAAAATCAAGATTCTGTAATTTCATATTCTTCTGAAACATTAAAATCTCACCTCCCTCTAAAGCCTGGAGCAGAAGTTACATTCCCTGTTACTTTGCGAGCCTGGCAGGTTGGTGTGGCAGATGCTGATAATACGAGGCAGTCCAAAGATGCAAGTTGCCCATCACTATTGATACACTATGCCGGTCCACTGAAAACCTCTGAAGATCCAAATGCTGTATCCCCCGGTAGACGCCTCGTTGTTCCCCTGCAGATTTGTGTTTTGCAAGGTTTGTCTTTTGTGAAGGCTCAGCTGCTTTCAATGGAATTTCCTGCTCATGTTAGTGAAAATCTTCCTAAGTTGGATGATGTGAATAATAGTTCCAATGGAGGACATGTTAACTCAGAGTCAAAAATGGACAGATTGGTGAAAATAGATCCTTTCAGAGGAAGCTGGGGACTGCGTTTTCTCGAACTTGAGCTGTCTAATCCAACTGATGTTGTGTTTGAAATCAATGTCTCTGTCAAACTGGAAAACAGCAGTAATGAGGACAATCTTTTAGCTGATCAGGATGCTACGGAATATGGCTATCCTAAAACAAGAATTGATAGAGATTGCTCAGCGAGGGTTCTTGTGCCTCTTCAGCATTTTAAATTACCCGTTCTTGATGATTCCTTTTTATCGAAGGACACTCTGACAGATGGGACTGGTGGAGGAAGAAATTTATCATTCTCTGAAAAGAGCAGCAAAGCTGAACTCAATGCTTGCATCAAGAACCTTGTATCTAGAATTAAGGTTCAATGGCACTCAGGACGCAATAGCTCTGGAGAGTTAAATATCAAGGATGCTATCCAGGCTGCTCTACAGACATCAGTCATGGACGTGTTGCTGCCAGATCCACTGACATTTGGCTTCAGGCTTGTTAGTGATGGTTTTGAATCAGATAGACCTGATCCTGTTAAAGAATCTGATTTACCTGAATCCCCTGCTTCCAAAAGTTCTGTGCTTGCACATGAAATGACACCAATGGTAGTTGTCGTTCGTAATAACACAAAGGACATGATTAAAATGAATCTTAATATTACATGCAGAGATGTAGCTGGGGAAAACTGTGTAGATGGTACCAAATCAACTGTGCTGTGGACAGGTGTTCTGAGTGAAATTACCATTGAAATTCCTCCACTCCAACAAATCAAACATTCTTTCTGCTTGCATTTCCTTGTCCCAGGAGAGTATACACTACTCGCTGCAGCAGTGATCGATGATGCGAATGACATCCTTCGGGCTCGTGCTCGGGCAACTTCAGCTGCTGAGCCAATTTTTTGTCGTGGACCACCATATCACCTTCGTGTCCTTGGGAATACATGA 3561 0.4386 MEPEVSIEGSSTIQIAVIPIGPIPPPLLRDYYSLLLPLHTIPLSSTTPFYTSLQKSPFAHQPWDSGSLRFKFVLGGATPSPWEDFQSHRKTLAVVGIVHCPSSPDLNDVVDQFASSCKSYPSSLADRCFAFYPNDSQLEDGSKRGGNLRLFPPADRATLEFHLNTMMQEVAASLLMEFEKWVLQAESSGTILKTPLDSQASLSSEEVIKAKKRRLGRAQKTIGDYCLLAGSPVDANAHYSTALELGRLTGDYFWYAGALEGSVCALLIDRMGQKDSVLEDEVRYRYNSVILNYKKSQDNTQRVSPITFELEATLKLARFLCRRELAKEVVELLTTAADGAKSLIDASDRLILYIEIARLYGSLGYQRKAAFFSRQVAQLYLQQENRLAAISAMQVLAMTTKAYHVQSRSSISDHSNQNKGSGSDKADGGKIYHQSVVSLFESQWSTIQMVVLREILLSAVRAGDPLTAWSAAARLLRSYYPLITPAGQNGLANALSNSSERLPPGTRCADPALPFIRVHSFPVHPTQMDIVKRNPAREDWWVGSAPSGPFIYTPFSKGDPNNIKKQDLIWIVGEPIQVLVELANPCGFDLRVDSIYLSVHSGNFDAFPVSISLLPNSSKVITLSGIPTSVGPVTIPGCIVHCFGVITEHLFKEVDNLLLGAAQGLVLSDPFRCCGSPKLKNVSVPSISVVPPLPLLISHVVGGDGAIILYEGEIRNVWISLANAGTVPIEQAHISLSGKNQDSVISYSSETLKSHLPLKPGAEVTFPVTLRAWQVGVADADNTRQSKDASCPSLLIHYAGPLKTSEDPNAVSPGRRLVVPLQICVLQGLSFVKAQLLSMEFPAHVSENLPKLDDVNNSSNGGHVNSESKMDRLVKIDPFRGSWGLRFLELELSNPTDVVFEINVSVKLENSSNEDNLLADQDATEYGYPKTRIDRDCSARVLVPLQHFKLPVLDDSFLSKDTLTDGTGGGRNLSFSEKSSKAELNACIKNLVSRIKVQWHSGRNSSGELNIKDAIQAALQTSVMDVLLPDPLTFGFRLVSDGFESDRPDPVKESDLPESPASKSSVLAHEMTPMVVVVRNNTKDMIKMNLNITCRDVAGENCVDGTKSTVLWTGVLSEITIEIPPLQQIKHSFCLHFLVPGEYTLLAAAVIDDANDILRARARATSAAEPIFCRGPPYHLRVLGNT* 1187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5570 1186 MobiDBLite consensus disorder prediction 408 423 - -
Mal1g5570 1186 MobiDBLite consensus disorder prediction 1045 1064 - -
Mal1g5570 1186 PANTHER TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 9 1 1184 IPR013935 -
Mal1g5570 1186 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 9 196 IPR013935 -
Mal1g5570 1186 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 201 271 IPR013935 -
Mal1g5570 1186 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 327 742 IPR013935 -
Mal1g5570 1186 MobiDBLite consensus disorder prediction 408 427 - -
Mal1g5570 1186 PANTHER TRAPP II COMPLEX, TRS120-RELATED 1 1184 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5570 K20306 - gmx:100784850 2060.03