Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5556 ATGGATACATTACCAACAACATCGACGGCGAAGCGAGGAGGAGGAAGATCAAAACTCGTTCAAACTTCAAAACCTTCTCTCCTCTTAGCCTTCTTCTCTTGCGTCGCTTGGCTTTACGTCGCCGGCAGGTTATGGCAAGATGCAGAGAATCGGAATTTACTTGCTGGTCTTCTCAAGAAGAATTCGGCACAGAGGCTTAAGGTTCTTACGGTGGAAGATAAGTTAATGGTACTAGGCTGCAGGGATCTGGAGAGGAGGATTGTGGAAGCTGAGATGGAATTGTCGTTGGCCAAGAGCCAAGGGTACCTCAAAGGACAACGGCAGCAAACTGGCTCTTCTTCTGACCGTAGGCTTCTTGCTGTTATTGGAGTATATACTGGATTTGGAAGCAAACTCAAAAGAAATGTCTTCAGAGGGTCTTGGATGCCTAGAGGTGATGCCTTGAAAAAACTTGAAGAAAGAGGAGTGGTCATACGTTTTGTAATTGGTCGGAGTCCTAATCGAGGTGATAGCTTGGATCGCAATATTAATGAGGAAAACCGCTCAACAAAGGATTTCTTGATTCTTGAAAGTCACGAGGAAGCTCAAGAAGAGTTGCCTAAAAAAGCAAAAATCTTCTTTAGTACGGCAGTTCAGAACTGGGATGCTGATTTTTATGTGAAAGTTGATGACAGTATTGACATTGATCTGGAGGGTTTAATTGCTCTTCTTGACCGTCGACGTGGCCAGGATGGCGCATATATTGGATGCATGAAGTCAGGAGACGTGATATCAGAAGAGGGAAAGCTTTGGTATGAACCTGATTGGTGGAAATTTGGCGATGAAAAATCGTATTTCCGACATGCATCTGGTTCACTTGTTATACTTTCAAAGAATTTGGCACAGTACATTAACATAAACAGTGTATCTTTGAAGACCTATGCCTATGATGATACATCGTTGGGATCATGGATGATGGGCATCCAATCAACATATGTAGACGACAGTCGGCTTTGCTGCAGTAGCATCGGTAAAGATAAGGTATGCTCGTTGGCTTGA 1038 0.4364 MDTLPTTSTAKRGGGRSKLVQTSKPSLLLAFFSCVAWLYVAGRLWQDAENRNLLAGLLKKNSAQRLKVLTVEDKLMVLGCRDLERRIVEAEMELSLAKSQGYLKGQRQQTGSSSDRRLLAVIGVYTGFGSKLKRNVFRGSWMPRGDALKKLEERGVVIRFVIGRSPNRGDSLDRNINEENRSTKDFLILESHEEAQEELPKKAKIFFSTAVQNWDADFYVKVDDSIDIDLEGLIALLDRRRGQDGAYIGCMKSGDVISEEGKLWYEPDWWKFGDEKSYFRHASGSLVILSKNLAQYININSVSLKTYAYDDTSLGSWMMGIQSTYVDDSRLCCSSIGKDKVCSLA* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5556 345 Gene3D - 147 330 - -
Mal1g5556 345 Coils Coil 80 100 - -
Mal1g5556 345 PANTHER HYDROXYPROLINE O-GALACTOSYLTRANSFERASE HPGT3 3 339 - -
Mal1g5556 345 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 3 339 IPR002659 GO:0006486|GO:0016020|GO:0016758
Mal1g5556 345 Pfam Domain of unknown function (DUF4094) 23 100 IPR025298 -
Mal1g5556 345 Pfam Galactosyltransferase 133 322 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5556 Mal-Chr1 130975786 130983060 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5556 76 345 Glycosyltransferase AT2G25300 78.148 4.45e-163 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5556 K20854 - gmx:100816327 625.55