Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5540 ATGGCTTCCACCAAGCTTAGTGCACTAATTATATTATTATCTCTCCTTGCTTATTCAACATTTTCACATGCTTGTAGTTCATGCAAACCACCAAAAAGTCCTCCACCACCCAAGGCTTGTCCTCCACCACCTTCAACAACACCTAAGGCTAGCCCTCCACCTAAGGCTAGTACTCCAACACCTAAAACTAGTCCTCCTACTCCTTCAACATCACAAAAATGTCCTAGGGACACATTAAAGCTAGGTGTTTGTGCTGATGTTCTAGGACTTGTTCATGTTATTGTTGGATCTCCTGCTTCAAGCAAGTGTTGTACATTGCTTCAAGGTTTGGCTGATTTGGATGCAGCAATTTGTCTTTGTACTGCTATTAAGGCTAATGTGCTTGGTATCAACTTGAATGTTCCTATCACACTCAGTCTCCTACTTAGTGCTTGTGAAAAATCTGTTCCTAAAGGATTCCAATGTTCATAG 471 0.414 MASTKLSALIILLSLLAYSTFSHACSSCKPPKSPPPPKACPPPPSTTPKASPPPKASTPTPKTSPPTPSTSQKCPRDTLKLGVCADVLGLVHVIVGSPASSKCCTLLQGLADLDAAICLCTAIKANVLGINLNVPITLSLLLSACEKSVPKGFQCS* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5540 156 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 76 155 IPR036312 -
Mal1g5540 156 MobiDBLite consensus disorder prediction 29 68 - -
Mal1g5540 156 SMART aai_6 74 155 IPR016140 -
Mal1g5540 156 Gene3D - 71 156 IPR036312 -
Mal1g5540 156 PANTHER PROLINE-RICH PROTEIN DC2.15 1 156 - -
Mal1g5540 156 MobiDBLite consensus disorder prediction 27 74 - -
Mal1g5540 156 CDD HPS_like 72 155 IPR027923 -
Mal1g5540 156 Pfam Hydrophobic seed protein 74 156 IPR027923 -
Mal1g5540 156 PANTHER - 1 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5540 Mal-Chr1 130658304 130658774 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5540 64 155 Acyl Lipid Metabolism Gene Families AT4G22490 41.053 7.76e-18 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5540 - - mtr:MTR_1g012710 181.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5540 1 130658304 130658774 Mal2g0904 2 10450515 10450907 PCT