Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5539 ATGGCTTCCAACAACCTTATTGCACTCATGATATTGTTTTCTCTCCTTGCTTATTCAACATGCTCCCATGCTTGTGATTCATGCAAACCAACTCCACCTAAGCCTAGCCCTCCTCCTCCTTGTCCTCCACCACCTTCAACAACACCTAAGGTTAGTCCTCCTTCACCAACAACACCTAAGGTTAGTCCTCCTTCTCCAACAACACCTAATCCTAGTCCTCCTACTCCTTCAACATCACAAAAATGTCCTAGTGACACATTAAAGCTAGGTGTTTGTGCTGATGTTCTAGGACTTGTTAATGTTATTGTTGGAAGTCCTGCTTCAAGCAAGTGTTGTACATTGCTTCAAGGTTTGGCTGATTTAGATGCAGCAGTTTGCCTTTGTACTGCTATTAAGGCTAATGTTCTTGGTATCAACTTGAATGTTCCTATCACATTAAGTCTCCTACTAAGTGCTTGTGAAAAATCTATTCCTAAAGGATTCCAATGTGGATAG 495 0.4162 MASNNLIALMILFSLLAYSTCSHACDSCKPTPPKPSPPPPCPPPPSTTPKVSPPSPTTPKVSPPSPTTPNPSPPTPSTSQKCPSDTLKLGVCADVLGLVNVIVGSPASSKCCTLLQGLADLDAAVCLCTAIKANVLGINLNVPITLSLLLSACEKSIPKGFQCG* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5539 164 PANTHER PROLINE-RICH PROTEIN DC2.15 1 163 - -
Mal1g5539 164 MobiDBLite consensus disorder prediction 27 82 - -
Mal1g5539 164 MobiDBLite consensus disorder prediction 30 78 - -
Mal1g5539 164 Gene3D - 79 164 IPR036312 -
Mal1g5539 164 SMART aai_6 82 163 IPR016140 -
Mal1g5539 164 CDD HPS_like 80 163 IPR027923 -
Mal1g5539 164 Pfam Hydrophobic seed protein 82 163 IPR027923 -
Mal1g5539 164 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 85 163 IPR036312 -
Mal1g5539 164 PANTHER - 1 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5539 Mal-Chr1 130564865 130565359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5539 72 163 Acyl Lipid Metabolism Gene Families AT4G22490 41.053 5.43e-17 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5539 - - mtr:MTR_1g012710 177.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5539 1 130564865 130565359 Mal1g5539 1 130564865 130565359 ECH