Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5530 ATGATGGATCCAGTTAACCCTTTGCCTGCTGATGGACCTGATGATGTCCACCAAAACGGTGTTCATGATCAACCTTCTAATTCTGGAGAGGACGGCGTTGTTTCAAATGATTTAGACCCTTGTGTTACTGAAACTACAAAAACTGTAGCTCCGAATGGGAATCTTGAAAATTTGAACCAGTCGGATAGCACTGCAACTGGAAACTCGTCTATGAAGGAAATCGAAGGATCGAATGACAACGTGGATGGCAATAATTTGACCGTTTCTGAGGAAAAGGAAGTGAAAATAAAAGTTCCAACCGAACAGTCAAGAGCACAAAAGGGCCCTGTCAAGAATAAGAATGCAAAGGTTGGTAGTTCCAGTGGTGTTCATGCAAGTTTGGTGAAAAACAGCAAAATTGGAAAAGACAAACAGGCAACATCCGCTGTTTCAAATGGCACTGCTGCTTTAGACTCTCGCCCAAGACAGCCTATTAAAAACCGTTCATTCAATGATCGGCAGTCTCAATTGTCCAAGCAACCTTCAAAGTCTGATGCAGCATCTTCTGAAGTTGCAGTGGAGAAGAAAAAGCCGAAATCATTGAAAAAGGGAGAAGCTGAATCTTCACTTAGCAATGCCGAAGATGCCAAACCTCGCAGGGTTGGGGCACTTCCAAATTACGGATTCAGTTTCAGGTGCGGTGAACGAGCTGAGAAAAGGAGAGAGTTCCTTACCAAGGTTGAGGAAAAGATTCAGGCAAAGGAGGAGGAGAAGAGTAGCTTGCAAGCAAAATCCAAGGAGAGCCAAGAAGCCGAGATTAAAAAGCTTAGGAAGAGCCTAACCTTTAAAGCAACTCCATTACCAACTTTCTATCAGGAGCCTGCTCCTCCTAAGGTGGAGCTGAAGAAGATACCAACTACAAGAGCAAAATCTCCCAAGCTCGGTCGGAAGAAGACTTCAACAAATTCAGAGTCGGATGGAAACGGTAGCTGCAGTTCTCGACAAGGTCGTTTAAGTCTGAACGAGAAAGTGTCACAGAGCAACTCCCCTAAAGGAGTTAGCCCTGTCCATCAAAAGAAGCCGCTACGAAAGTCCCTTCCTACTCGACTCGCTTCTGAAAGGACCAATTCATCCAATTCAGCAGCTGCACCTACATCCAGGTCAACAAAGAAAGATACTAGCTTATCCAAAGCTACAGGGGAGGAGAAAACTGAGATTGTCGCAGCCAATGAAGAAAACAGTACCTTGTCCAGTGACACAAATGTTGCTCTACCTCAGAATGCGGTTCCTTTAGATAAGCCAAGTGAAGAAGAATTCCATGTGAATGGTGACATAGTGGCTGAAGAGAATCCTCAGCTCGTGTTGTCACAAGAACCGATCATGACAGTGCAGTGA 1374 0.4469 MMDPVNPLPADGPDDVHQNGVHDQPSNSGEDGVVSNDLDPCVTETTKTVAPNGNLENLNQSDSTATGNSSMKEIEGSNDNVDGNNLTVSEEKEVKIKVPTEQSRAQKGPVKNKNAKVGSSSGVHASLVKNSKIGKDKQATSAVSNGTAALDSRPRQPIKNRSFNDRQSQLSKQPSKSDAASSEVAVEKKKPKSLKKGEAESSLSNAEDAKPRRVGALPNYGFSFRCGERAEKRREFLTKVEEKIQAKEEEKSSLQAKSKESQEAEIKKLRKSLTFKATPLPTFYQEPAPPKVELKKIPTTRAKSPKLGRKKTSTNSESDGNGSCSSRQGRLSLNEKVSQSNSPKGVSPVHQKKPLRKSLPTRLASERTNSSNSAAAPTSRSTKKDTSLSKATGEEKTEIVAANEENSTLSSDTNVALPQNAVPLDKPSEEEFHVNGDIVAEENPQLVLSQEPIMTVQ* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5530 457 MobiDBLite consensus disorder prediction 309 347 - -
Mal1g5530 457 MobiDBLite consensus disorder prediction 105 151 - -
Mal1g5530 457 MobiDBLite consensus disorder prediction 402 418 - -
Mal1g5530 457 MobiDBLite consensus disorder prediction 161 180 - -
Mal1g5530 457 MobiDBLite consensus disorder prediction 362 386 - -
Mal1g5530 457 MobiDBLite consensus disorder prediction 243 420 - -
Mal1g5530 457 MobiDBLite consensus disorder prediction 387 401 - -
Mal1g5530 457 Pfam Targeting protein for Xklp2 (TPX2) domain 222 293 IPR027329 -
Mal1g5530 457 MobiDBLite consensus disorder prediction 20 85 - -
Mal1g5530 457 MobiDBLite consensus disorder prediction 243 272 - -
Mal1g5530 457 MobiDBLite consensus disorder prediction 1 220 - -
Mal1g5530 457 PANTHER PROTEIN WVD2-LIKE 5-RELATED 2 447 - -
Mal1g5530 457 MobiDBLite consensus disorder prediction 182 207 - -
Mal1g5530 457 Coils Coil 237 267 - -
Mal1g5530 457 MobiDBLite consensus disorder prediction 86 100 - -
Mal1g5530 457 PANTHER PROTEIN WVD2-LIKE 4 2 447 IPR044833 GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5530 Mal-Chr1 130403835 130408487 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5530 - - gmx:100786958 602.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5530 1 130403835 130408487 Mal1g5530 1 130403835 130408487 ECH
Mal1g5530 1 130403835 130408487 Mal2g0882 2 10213310 10216864 PCT