Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5521 ATGAAGTTCTGGAAGATTCTCAACAACCAGATCGAGCAAACGTTACCGGATTGGCGTGATAAGTTTCTTTCTTACAAGGATCTTAAGAAGCAGTTGAAACTCATTGTTCCTAAAGAGGTTGATTCTTCTTCTTCTTCTTCGAAACGGCGTCGTTTGGATGATGATGGTGCTGCTGAAGGTGAAGTGACGAAAGAGGTTAATGATTTTCTTAGGTTGTTGGAGGTTGAAATTGAGAAATTTAATGGGTTTTTTGTTGAGAAAGAAGAAGAATATGTTATCAAATGGAAGGAATTGCAAGACAAAGTTGCATGGGCCAAGAGTTCTGATGCAGAGTTGATGACAGTAGGGAGCGAAATAGTGGATTTTCATGGAGAGATGGTTTTGTTAGAGAACTATAGTGCACTTAACTACACAGGTCTGGTTAAGATAATAAAGAAATATGATAAGCGAACAGGTGCTCTACTTCGGTTACCTTTTATCCAAGATGTGTTGAACCAGCCATTCTTCAAAATTGATGTGCTTAACAAGCTTGTAAAGGAGTGTGAGGTGATGCTAAGTATTATTTTCCCCAAAAATGGTCCTCTAGGCCAATCCTTATCAACAAGTGAAGTTTTTGAGGAAGTTGCTCGTGGCTCCACGGCTGCAAACGAAACTAAAGACACACTGGAGCATGTCCCCAAAGAACTATCTGAGATCCAAAATATGGAGAACATTTTCATCAAACTAACTACATCAGCACTGGATACTCTTAAAGAGATTAGGGGTGGAAGCTCAACTGTAAGCATATACTCATTGCCTCCTCTGCATAGTGAGACTCTTGTAGAGGATTGA 831 0.3971 MKFWKILNNQIEQTLPDWRDKFLSYKDLKKQLKLIVPKEVDSSSSSSKRRRLDDDGAAEGEVTKEVNDFLRLLEVEIEKFNGFFVEKEEEYVIKWKELQDKVAWAKSSDAELMTVGSEIVDFHGEMVLLENYSALNYTGLVKIIKKYDKRTGALLRLPFIQDVLNQPFFKIDVLNKLVKECEVMLSIIFPKNGPLGQSLSTSEVFEEVARGSTAANETKDTLEHVPKELSEIQNMENIFIKLTTSALDTLKEIRGGSSTVSIYSLPPLHSETLVED* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5521 276 PANTHER SPX DOMAIN-CONTAINING PROTEIN 1 1 271 - -
Mal1g5521 276 CDD SPX_AtSPX1_like 2 150 - -
Mal1g5521 276 Pfam SPX domain 1 51 IPR004331 -
Mal1g5521 276 Pfam SPX domain 119 162 IPR004331 -
Mal1g5521 276 ProSiteProfiles SPX domain profile. 1 161 IPR004331 -
Mal1g5521 276 PANTHER SPX DOMAIN-CONTAINING PROTEIN 3 1 271 IPR031142 GO:0016036
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5521 Mal-Chr1 130288495 130291563 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5521 - - adu:107495354 412.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5521 1 130288495 130291563 Mal1g5521 1 130288495 130291563 ECH
Mal2g0874 2 10120540 10121645 Mal1g5521 1 130288495 130291563 ECH