Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5482 ATGGGTAGTGAGAGTGAAATGATCCCATGTCTAGATTTTTCCATGTTTGAGTTAGGATTCGATCAAGGGAGTGAGGATTGGAAAAAAATGAGCAAAAAAGTGAGAGATGCATGTGAGAATCCTGGTTGTTTTATCTTAAAGTATGATAAGAATAAGTTCCCAGAGAGTTTATTTGAAAACATGTTAATGGGAATGAAATCCTTGTTTGATTTACCTGAAGAAATTAAGAGGAAGCACTTAAGTGATGGGAGATTCAGTGGTTACACTAGTGATCGTCCTCAAAGTGAAAACTTTGGGATTGATGATATTGTTCTTGAGGATACTTCTCTGGCCTTTACTAATCTCATGTGGTCTCAAGGAAATCCAACTTTTAGTGAGACAATGAAGAGCATGAGCTCCAAGATGCTTGAACTGAGTTTCCTGATTTTCAAGATGATTCTAGATGATTATGGTCTTCCAAAACAATACACTTCAGATATTGAAGCATTGCAGAGTTGTACTAAACTTCGGTTGATGAAGTACAAAGTTCCTGAAATCAACAAAGATAATGAAGCTGGCTTGTTCCCTCACACTGACAAATCTACATTTACCATTTTATGCCAAAATGAAGTCAAAGGTCTTGAGGTTCTAACAAAAACAAACAAATGGATTGATGTTAACATACCCCAAGGAGGATTCGTGGTCTTTGTTGGTGACATACTCAAGGCATGGAGCAATGGAAGACTTCATGCGCCTACACATAGAGTGACAATGTGTGGAGACAAAGATAGGTACTCATTTGGACTTTTTGCATTCCCAAAGAATGAGGTGAAAATTGAGGTGCCACAAGATTTGGTGGATGATAAAATGCATTCTCTTCGTTACAAGTCATTCAATTATGATGGTTACATGGACTACTTCTTTTCAACTTTCAAAGAAGATGCAATAGATGCATATGCAGGAGTTTGA 948 0.3724 MGSESEMIPCLDFSMFELGFDQGSEDWKKMSKKVRDACENPGCFILKYDKNKFPESLFENMLMGMKSLFDLPEEIKRKHLSDGRFSGYTSDRPQSENFGIDDIVLEDTSLAFTNLMWSQGNPTFSETMKSMSSKMLELSFLIFKMILDDYGLPKQYTSDIEALQSCTKLRLMKYKVPEINKDNEAGLFPHTDKSTFTILCQNEVKGLEVLTKTNKWIDVNIPQGGFVVFVGDILKAWSNGRLHAPTHRVTMCGDKDRYSFGLFAFPKNEVKIEVPQDLVDDKMHSLRYKSFNYDGYMDYFFSTFKEDAIDAYAGV* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5482 315 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 159 266 IPR005123 -
Mal1g5482 315 Pfam non-haem dioxygenase in morphine synthesis N-terminal 8 93 IPR026992 -
Mal1g5482 315 Pfam 2OG-Fe(II) oxygenase superfamily 177 266 IPR044861 -
Mal1g5482 315 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE AOP1-RELATED 4 314 - -
Mal1g5482 315 SUPERFAMILY Clavaminate synthase-like 6 304 - -
Mal1g5482 315 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 4 314 - -
Mal1g5482 315 Gene3D - 5 312 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5482 Mal-Chr1 129723263 129728511 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5482 8 263 Glycosyltransferase AT5G59530 25.746 1.82e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5482 - - gmx:100817159 351.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5482 1 129723263 129728511 Mal2g0837 2 9678810 9680662 PCT