Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5481 ATGGCTACTACACTTTCTGAAGCCTATAGAGATTATCCTCTTCACCTCCATCATATTATCCCCTTAGACTTTTCTTCATTTAGAACTTTACCTGATTCTCATGCATGGTCTCAATCTAATGATGATCAAGGTAATGATGATTTCGTCACATCCAATGGATGCTATGATGACAAGGATGGATCATGTATTCCAATCATTGATCTCAATGATCCTAATGCAATGGAACAAATAGGCCTTGCATGTGAGAAGTGGGGTGCCTTCCAATTGAAGAATCATGGCATACCTTTAAATTTTATTGAAGAGGTTGAAGAAGAAGCAAAGAGACTCTTTTCTCTTCCTTCCAAGGAGAAACTTAAAGCCCTTAGATCCGCTGGCGGTGCCACCGGATATGGTAGAGCTCGAATATCACCATTCTTCCCCAAATACATGTGGCATGAAGGATTTACAATCATGGGGTCACCATCCAATGATGCCAAAAAGATCTGGCCTAATGACTACAAAAGGTTTTGTGACATAATGGAGAACTACCAAAAGCAAATGAAGACACTAGCAGAGAAACTAACAAACATGTTATTCAACATATTAGGAATTTCACAAGAACAAAACAAATGGGTTGGTTCAAACAACCATGTTGGAGCAATGCAACTAAACTTCTACCCATGTTGTCCAGACCCAAAAAAAGCAATGGGCTTGGCCCCACACACAGACACATCCCTTTTCACAATCCTTCATCAAAGTCAAACAAATGGACTAGAAATTTTCAAAGAAGGTGTAGGGTATGTTCCTGTGGACCCTCATCCAAATACACTTGTTGTTAACACTGGTGACATTCTTCATATATTATCAAATTCAAGGTTTAGATGTTCTCTTCATCGTGTGGTTGTGAATGATATTAAGGATAGATATTCTGTGGCTTATTTTTATGGACCTCCTGTTGATTATTTGGTTTCTCCTAAGGTTGGTGAAAATTCTTTGCCACATTTTCGTGCTTTGACTGTGAAGGATTATATTGGGATTAAAGCCAAAAATCTAAGGGGTGCTTTGTCTTTGATTAGTACACTGCTAGATCAAGATGATTAA 1080 0.3843 MATTLSEAYRDYPLHLHHIIPLDFSSFRTLPDSHAWSQSNDDQGNDDFVTSNGCYDDKDGSCIPIIDLNDPNAMEQIGLACEKWGAFQLKNHGIPLNFIEEVEEEAKRLFSLPSKEKLKALRSAGGATGYGRARISPFFPKYMWHEGFTIMGSPSNDAKKIWPNDYKRFCDIMENYQKQMKTLAEKLTNMLFNILGISQEQNKWVGSNNHVGAMQLNFYPCCPDPKKAMGLAPHTDTSLFTILHQSQTNGLEIFKEGVGYVPVDPHPNTLVVNTGDILHILSNSRFRCSLHRVVVNDIKDRYSVAYFYGPPVDYLVSPKVGENSLPHFRALTVKDYIGIKAKNLRGALSLISTLLDQDD* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5481 359 Pfam 2OG-Fe(II) oxygenase superfamily 214 310 IPR044861 -
Mal1g5481 359 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 210 310 IPR005123 -
Mal1g5481 359 SUPERFAMILY Clavaminate synthase-like 17 345 - -
Mal1g5481 359 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 12 347 - -
Mal1g5481 359 Pfam non-haem dioxygenase in morphine synthesis N-terminal 63 163 IPR026992 -
Mal1g5481 359 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 12 347 - -
Mal1g5481 359 Coils Coil 173 193 - -
Mal1g5481 359 Gene3D - 19 344 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5481 Mal-Chr1 129712725 129715375 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5481 63 336 Glycosyltransferase AT5G59530 30.201 2.07e-32 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5481 K04124 - gmx:100808546 550.436