Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5476 ATGCTGAAGCAAATTTTCAACAAGCTTCCCCGGAAGTCGTCGAAAACCGATTCGGATCCGGCCGAATCCCCACGAGCCACCGGTAAAAACCACCACCGACCAAATGGTAGCGCTGCTTCGTTGAAACGAGCTTCATCGTCCGCAGTGTTTCCAGCCAGCATGGTTTCTGGGATTGAACCATTGGTGCCATTTAAGGATGTTCCAAATGCTGAAAAGATGAACTTGTTTGTGAGTAAATTGAGTCTTTGTTGTGTAACATTTGATTTCACTGATCCTGGTAAGAACAATGCTGAGAAAGATGTGAAAAGGAAAACTTTGGTTGAACTTGTTGATTTTGTAGCATGTGGATCAATGAAGTTTAGTGAGCCTGCTATTCTTGCAATGTGTAGAATGTGTGCTATTAATTTGTTTAGAGTTTTTCCACCTAATTATAGGGCTAATGGTGTTGTTGCTAGTGGTGGTGAGAATGATGATGACGATCCTATGTTTGATCCTGCTTGGCCACATTTGCAACTTGTTTATGAATTGCTGCTTAAATTTATCTCATCTCCGTGTCTCGATGCTAAGGTAGCGAAAAAGTATTTTGATCATTCGTTCATTTCCAAATTGCTTGAGTTGTTTGATTCCGAGGATCCTAGAGAAAGAGACTGTTTGAAGACAATTCTGCATAGGGTTTATGGGAAGTTCATGGTGCATAGGCCGTTTATTCGGAAATCGATTAGCAATATATTCTATCGATTTGTGATTGAGACCGAGAAACATAATGGGATTGCTGAGTTGCTGGAGATTTTCGGGAGTGTGATTAGTGGATTTGCTTTACCTTTGAAAGAGGAACACAAAATGTTCTTGTGGAGAGTTTTGATCCCCTTGCACAAGCCTAAATCTTTGGGCATCTATTTTCAGCAACTGTCCTTCTGTATTACGCAGTTCTTAGAGAAGGAGCCGAAGTTAGCAAGCATTGTTATAAGTGGCTTGTTAAAATATTGGCCGGTAACAAATAGTCAGAAAGAGGTGATGTTTCTGGGGGAATTGGAAGAAATTTTGGAAGCAATTAACATGGTAGAGTTCCAAAGGATCATGGTTCCACTGTTTTTGCGGATCGGGTGTTGCATTAACAGCCTACATTTTCAGGTAGCTGAAAGGACCCTTTTCTTATGGAATAATGACCACATTGTAAATTTGATTGCTCATAACCGTCAAGTGATCCTTCCCCTCATTTTTCCAGCACTTGATAGGAATATCAAAAGCCACTGGAACCCAGCAGTTGTAAACTTAACTCATAATATCAGAAAGATGTTCTTGGAGATGGATGAGAAGCTCTTCATATCTTGTCATACTCACTTTAAGGAGGAAGAAGCAATGTTAATCTCAGAAGCTGAGAAGCGAAAGGAGGCTTGGAAACAACTAGAGCATGCAGCCAGTCTCAAACCTGTAATTGGAAACACCGCTGTTTTAGTGTCTCCTTTGATGACATGA 1476 0.4072 MLKQIFNKLPRKSSKTDSDPAESPRATGKNHHRPNGSAASLKRASSSAVFPASMVSGIEPLVPFKDVPNAEKMNLFVSKLSLCCVTFDFTDPGKNNAEKDVKRKTLVELVDFVACGSMKFSEPAILAMCRMCAINLFRVFPPNYRANGVVASGGENDDDDPMFDPAWPHLQLVYELLLKFISSPCLDAKVAKKYFDHSFISKLLELFDSEDPRERDCLKTILHRVYGKFMVHRPFIRKSISNIFYRFVIETEKHNGIAELLEIFGSVISGFALPLKEEHKMFLWRVLIPLHKPKSLGIYFQQLSFCITQFLEKEPKLASIVISGLLKYWPVTNSQKEVMFLGELEEILEAINMVEFQRIMVPLFLRIGCCINSLHFQVAERTLFLWNNDHIVNLIAHNRQVILPLIFPALDRNIKSHWNPAVVNLTHNIRKMFLEMDEKLFISCHTHFKEEEAMLISEAEKRKEAWKQLEHAASLKPVIGNTAVLVSPLMT* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5476 491 Gene3D - 68 472 IPR011989 -
Mal1g5476 491 MobiDBLite consensus disorder prediction 1 42 - -
Mal1g5476 491 PIRSF PP2A_B56 5 487 IPR002554 GO:0000159|GO:0007165|GO:0019888
Mal1g5476 491 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 63 473 IPR002554 GO:0000159|GO:0007165|GO:0019888
Mal1g5476 491 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 487 - -
Mal1g5476 491 MobiDBLite consensus disorder prediction 10 29 - -
Mal1g5476 491 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 487 IPR002554 GO:0000159|GO:0007165|GO:0019888
Mal1g5476 491 SUPERFAMILY ARM repeat 74 469 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5476 Mal-Chr1 129631003 129633492 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5476 K11584 - gmx:100781390 867.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5476 1 129631003 129633492 Mal2g0825 2 9568530 9570823 PCT