Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5443 ATGGAAGGTGGAAAACTAAGGATATGTTTTGTTCTTATGTTCTTTGCTACATCACTATTGGAAGTGGATGGAATTGGAGTTAATTGGGGAACACAATCAACACATCCATTACCACCATCTACTGTGGTGAAAATGTTAAAAGATAATGGTATTCAAAAAGTTAAACTTTTTGATGCTGATCCTAATATTCTTAATGCTTTAAAGAAATCTGGGATTCAAGTTATGGTTGGTATACCTAATGATTTGCTTTATACTTTTGCTAATAGTCGTCAAGCAGCTGAAAAATGGGTTGCTAAGAATGTTTCTGCTCATGTTTCATCTGGTGGTGGAGTAGATATCAGGTACATTGCTGTTGGAAATGAACCATTCTTGTCAACTTACAATGGTACCTTTGAAGCCACAACACTTCCAGCTCTTGTAAATATCCAAAACGCTCTTATAAAAGCTGGTTTGGGAAATTCAATCAAAGTCACTGTCCCTTCAAATGCTGATGTGTATCAGAGCTCATCCGGTAACCCTTCTGATGGCGACTTTAGGACAGACATCCATGATCTCATGGTACAGATTGTCAAGTTTTTGAGTCAGAACAGTGCTCCATTTACAGTGAACATTTATCCTTTTATTAGTCTTTATGAAGATCCCAATTTTCCAGTCGACTATGCATTCTTCAACGGTTTTAATGATCCTTTAAACGACAACGGAAAGATCTACGATAATGTCTTTGATGCTAACTACGATACTCTAGTATGGGCGTTGAATAAAAATGGTTTCGGTAACATGCCCATAATTGTAGGAGAGATCGGTTGGCCTACAGACGGAGACAGAAATGGAAATCTTCAACTGGCGCAACGTTTTAACCAAGGCTTCATGACTCGATTTATTGCTGGAAAGGGGACTCCGTTGAGACCAGGTCCTATGGATGCATACTTGTTTAGTTTAGTAGATGAAGACGACAAAAGCATTCAACCGGGTAACTTTGAACGTCATTGGGGATTGTTTTACTACGATGGACGGCCGAAATACGTACTCAACATTGGATCAAGAACCAACGGATTAGTAGGTGCTACCGGAGTAGCACATCTTCCCAAAAAGTGGTGTATTTTGAAACCCTCGGCAAATCTGAACAGTGATCAAGTTGCGCCGAGTGTGTCTTATGCTTGTCAAAATGCAGATTGCACTAGTCTTGGTTATGGAACTTCATGTAGCGGTTTAGATATTCGCGGTAACATCTCTTACGCGTTTAATAGCTACTATCAGGTGAATGATCAGGTTGATGGAGCTTGCAAATTTCCCGGTCTTTCCACTGTCACTGACAGAGATCCTTCAACTCCAGATTGCACATTCAAAATCATGATTCAAACTGATTCTGCGAGGAGAATCGGGTCTCCTACAATACTACTGTTTCCTTTTTTGCTTTTTGCTTTTTTGTAA 1431 0.3955 MEGGKLRICFVLMFFATSLLEVDGIGVNWGTQSTHPLPPSTVVKMLKDNGIQKVKLFDADPNILNALKKSGIQVMVGIPNDLLYTFANSRQAAEKWVAKNVSAHVSSGGGVDIRYIAVGNEPFLSTYNGTFEATTLPALVNIQNALIKAGLGNSIKVTVPSNADVYQSSSGNPSDGDFRTDIHDLMVQIVKFLSQNSAPFTVNIYPFISLYEDPNFPVDYAFFNGFNDPLNDNGKIYDNVFDANYDTLVWALNKNGFGNMPIIVGEIGWPTDGDRNGNLQLAQRFNQGFMTRFIAGKGTPLRPGPMDAYLFSLVDEDDKSIQPGNFERHWGLFYYDGRPKYVLNIGSRTNGLVGATGVAHLPKKWCILKPSANLNSDQVAPSVSYACQNADCTSLGYGTSCSGLDIRGNISYAFNSYYQVNDQVDGACKFPGLSTVTDRDPSTPDCTFKIMIQTDSARRIGSPTILLFPFLLFAFL* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5443 476 Gene3D Glycosidases 23 351 - -
Mal1g5443 476 SUPERFAMILY (Trans)glycosidases 25 344 IPR017853 -
Mal1g5443 476 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 5 12 456 - -
Mal1g5443 476 ProSitePatterns Glycosyl hydrolases family 17 signature. 260 273 IPR000490 GO:0004553|GO:0005975
Mal1g5443 476 Gene3D - 362 458 - -
Mal1g5443 476 SMART X8_cls 364 448 IPR012946 -
Mal1g5443 476 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 12 456 IPR044965 GO:0004553|GO:0005975
Mal1g5443 476 Pfam X8 domain 364 434 IPR012946 -
Mal1g5443 476 Pfam Glycosyl hydrolases family 17 25 344 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5443 Mal-Chr1 128850733 128853762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5443 4 459 Glycoside Hydrolase AT4G31140 68.490 0.0 661
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5443 K19893 - gmx:100790297 802.357
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0792 2 9128922 9131280 Mal1g5443 1 128850733 128853762 PCT