Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5438 ATGGCAACAGTTTCAAAGATATTGTCACTGTTCTTATCATCATCATCCAAACCTAAACTCATTCGTTACACCAATTCCTTTCTTCTCTCTCCTTCTTCTTCAAATCTCAGAACCCTCAGCACTACCACTACTCGAACCACAAAGACGAAGAAAACCGAAGCAGCACTTGCAAAGGAAAAGAGAAGAACACGTTCCGACAAAGAACTCGACAAGGACACAATAATTGAGCTTTACAATAACAATTCTCATCTTCATATTCCTGTTATGCTTTCTGAAGTTTTGGATGTGTTCTCCAATTGTTCCTTATCTTCTTTCGTTGATTGTACTCTTGGTGCTGCTGGTCACTCCACCAATGTGATTAGAGGTCATCCAGAGTTGAAGTATTTTGTTGGGATGGATGTGGACCCTGTGGGACGTGACACAGCTCAATCCCGCATCAGTTCAGTTTTGGACGATAGTGAGTCAAGTGTGAAAGTGTTTACCGTGTTAAGGAATTTTAGACACATCAAGTCTGTGCTTAGAGGAACAGGCGAGGAACACTTAGGGGTTGCATCTGTTGATGGCATCTTGATGGACCTGGGAATGTCATCTATGCAGGTGGATGATCCTCAAAGAGGATTTAGTGTGCTTGGTGATGGACCCCTTGATATGCGCATGGATCCTCAGGCAAGCCTTACAGCAGAAGACATATTAAATTCTTGGCCAGATACTGAAGTGGGCCGTATCCTTAGGGATTATGGGGAAGAGAGTAATTGGCGTACTCTGCAGAAGAAAATTGTCCAAGCCCGTTTAGAAGGTGGGTTGCATTCCACTACCGACTTGCTGGATCTCATTCAGCGTGTGACTCCTGGAATGAAAGGGGGAAGACAAGGTTGGATAAAAACAGCAACCCGGGTATTTCAAGCATTGAGAATCGCTGTCAATGATGAACTGAAGACTCTCGAGGATTCCCTCTATTCTTGTTTTGACTGCCTTGCACCTGGGGGCAGGCTTGCTGTCATATCCTTTCACAGTTTGGAGGACAGAATTGTGAAGCAAACATTTCTTAATATAATTAAAGGAAATGAAGACATGGGAGAAGGGGAGAGCTGCAACAGTGATCTGAGGAAGATGATTGATGAAATCAAAGAAAAAGAAGCATGGATAAAACAAGTAATGCATGGATCAAATGGAATAATTCTCACAAAAAGACCGATCACGCCGTCAGAAGAAGAAGAGAACTTGAACCGCCGAAGTAGAAGTGCAAAGCTTAGGGTTATCCAGAAGCTTTGA 1272 0.4316 MATVSKILSLFLSSSSKPKLIRYTNSFLLSPSSSNLRTLSTTTTRTTKTKKTEAALAKEKRRTRSDKELDKDTIIELYNNNSHLHIPVMLSEVLDVFSNCSLSSFVDCTLGAAGHSTNVIRGHPELKYFVGMDVDPVGRDTAQSRISSVLDDSESSVKVFTVLRNFRHIKSVLRGTGEEHLGVASVDGILMDLGMSSMQVDDPQRGFSVLGDGPLDMRMDPQASLTAEDILNSWPDTEVGRILRDYGEESNWRTLQKKIVQARLEGGLHSTTDLLDLIQRVTPGMKGGRQGWIKTATRVFQALRIAVNDELKTLEDSLYSCFDCLAPGGRLAVISFHSLEDRIVKQTFLNIIKGNEDMGEGESCNSDLRKMIDEIKEKEAWIKQVMHGSNGIILTKRPITPSEEEENLNRRSRSAKLRVIQKL* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5438 423 Gene3D Vaccinia Virus protein VP39 85 420 IPR029063 -
Mal1g5438 423 SUPERFAMILY Putative methyltransferase TM0872, insert domain 205 308 IPR023397 GO:0008168
Mal1g5438 423 MobiDBLite consensus disorder prediction 38 65 - -
Mal1g5438 423 TIGRFAM TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 81 422 IPR002903 GO:0008168
Mal1g5438 423 MobiDBLite consensus disorder prediction 51 65 - -
Mal1g5438 423 Gene3D Putative methyltransferase TM0872, insert domain 203 310 IPR023397 GO:0008168
Mal1g5438 423 Hamap Ribosomal RNA small subunit methyltransferase H [rsmH]. 85 423 IPR002903 GO:0008168
Mal1g5438 423 Pfam MraW methylase family 84 422 IPR002903 GO:0008168
Mal1g5438 423 PANTHER S-ADENOSYL-METHYLTRANSFERASE MRAW 61 423 IPR002903 GO:0008168
Mal1g5438 423 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 85 423 IPR029063 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5438 K03438 - gmx:100803819 566.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5438 1 128787527 128791568 Mal1g5438 1 128787527 128791568 ECH