Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5428 ATGGGCACCATCACATTCCAGCTTTGTGCGGGTTTAAATTTAAGCGCTTCCAATCATATTCATATTCAAGTGAGGAGTACCAATTCCAAGTTTGCACCTCAATCAGTGAGAGCACTTCCTATACGTATATTATCCGTGGGAAAAAAGCGATCACATGGACTGCAACTCATGGTCGACGAGTATGTTGAAAAGATCAAATACTATTGCAGTGTTGAGGATGTTCAAATTCGGTCTAATCCTAGAAATGCACGTGACCATAGGGCTCAGGTTGATGACGAAGACATGGCACTGATGAATCTTATAAGGTCTGATGATTGGGTTGTGATGTTGGATGAGCATGGACAAGATTTACGATCTGAGCAAATGGCAGAGTTGGTGGCTGATGCAGGAAATACTGGTGCTTCACGTATATCTTTCTGTATTGGTGGACCCTATGGTCATGGAAGAAAAATAAGAGAACGTGCTAACTTATCAATCAAGTTATCTTCAATGGTCTTAAATCATCAAATAGCATTACTTGTGCTTGTGGAACAGCTTTACAGGTCATGGACAATTTTAAGGGGACAAAAGTACCACCATTAG 582 0.4089 MGTITFQLCAGLNLSASNHIHIQVRSTNSKFAPQSVRALPIRILSVGKKRSHGLQLMVDEYVEKIKYYCSVEDVQIRSNPRNARDHRAQVDDEDMALMNLIRSDDWVVMLDEHGQDLRSEQMAELVADAGNTGASRISFCIGGPYGHGRKIRERANLSIKLSSMVLNHQIALLVLVEQLYRSWTILRGQKYHH* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5428 193 CDD RlmH-like 41 193 IPR003742 GO:0006364|GO:0008168
Mal1g5428 193 SFLD SPOUT Methyltransferase 14 193 - -
Mal1g5428 193 PANTHER METHYLTRANSFERASE 23 193 IPR003742 GO:0006364|GO:0008168
Mal1g5428 193 Pfam Predicted SPOUT methyltransferase 41 192 IPR003742 GO:0006364|GO:0008168
Mal1g5428 193 Gene3D - 38 193 IPR029026 -
Mal1g5428 193 SUPERFAMILY alpha/beta knot 40 191 IPR029028 -
Mal1g5428 193 Hamap Ribosomal RNA large subunit methyltransferase H [rlmH]. 39 193 IPR003742 GO:0006364|GO:0008168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5428 K00783 - gmx:100796609 292.352