Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5348 ATGTTTTCCTCTTCCCCTCGGAATCGCCTCAATCAGTTTTATACTACGAAGAAACGAAAAGTGATTTCGCCGGCTCCGAAGGCGGGGAGAATTGAGAAAGGTGCGAGGATTGTGGTTGATGGATCTCCAAGTGCTAAAGGTTCATTGGACAGTTACTTGGTTCCGTCGCAGGAGGAGCCGGTGAGGCCGGATTTGGTGAGGAGGAAATTGGGATTAGACATTGGTAGTTCTCTTGATAAGCAGCCTGTTTCATTTGCTGAAGAGGTTCGACATTCAGATGCTACTCGGCCTGGGATTGAAAATGAAGTGATTGTGATTGATGATGATTCTGTGAAGGAAAACAATTTAAGTGATTTTGGAGATGGTGGTGAAAAGTCGGAGCTCAAACAGTTTAAAGCAGAGCTTTTTTCTCTCTTTTGCGGTAAACTGCCACAAGAGATGAGAGTGGAAAGCCACAAGAGACATGAATCTGTGACATTAGTAGAGGAGAATAGTAGTATACGGCAGAAGTGTGATGACACTAGTGTGCCACCTTTTGGTCGTGAAAACATTTCGAGCGACAAGAACTATGTAGGCATGAAGTTTGGTGTTGTTGGTGATACTATGGAAAGCATTCCAGGCTGCTCTGCAAAGGTTTCTGGTGGTGGTGGTGATACTAATGCCTTTGATGCGGGTTTTAGAAAATGTAGTAATACTCCTACGTCTACGAATATGGCCGAATGCCAAACACCGGGATCTTTGATTGTTAAAGCATGCATTAAAGGGACTCCAAAGTCAACACGCGGAAGCTCGATGTTTTCGCCCGGAGAGGCTTTTTGGGACGAAGCAATTCAACTTGCTGATGGTTTGGTTGTTCCCACGGGTAATAATTCTTCTATGGTTATAGAAGAAAGCATTGTGGTGCGAGACCAAGTTGAGATGAAGAACTCATGTAACTTACAAAATTATGATGGCAAGGCAAGGAAGATATTGGATCAAAGTAAAAATATAGGGTTGGCTGAGATGCACACAAAAGATTCTATGAAAGAAGCAACCAGCCTTCCTGTTAAGCATTTTGATTTTTCAAATGATAATAATATGGATGAAAATACCGTTCAAAATTGTCGTGTCGATAATCAGGTCAAAGTTACTTGTGGGTCTGGGATCAAGTATGAATCTACTTCTGTGGCAAGTCATACATATGAACAGCCGTGTGAAGTGCACGAGAAGATTTTACTAGATGCATTAGACAAAAGAGTGAGAAAGGATAATTTCAATATGCCATCTAATAATTTTAATTCACCCAACAACGAGGCCAGGACAACACTTAGTATACATGGATCTTTTGAAGCCACAACTCCTTCAAGTAATGTGTCACTTGTTGATCATTTAGACCTACATAGCTGGCTTCCTCCTGAAATATGCAGCATATATAGAAAGAAAGGCATTTCTAAGCTTTACAAGTGGCAGGTTGACTGCCTTCGGGTGAATGGTGTTCTACAAAGAAGAAATCTTGTGTATTGTGCTTCTACTAGTGCTGGAAAAAGTTTTGTTGCTGAGATTTTAATGTTGCGGAGGGTGATAACAACTGGAAAAATGGCAATACTTGTTCTTCCATACGTATCAATTTGTGTAGAAAAGGCAGAACATCTTGAAAAGCTTCTTGAGCCACTTGGTAAACATGTTCGTAGTTATTATGGGAACCAAGGTGGTGGAACACTTCCTAAAGATACTTCTGTAGCTGTATGCACAATAGAGAAGGCAAACTCTCTAATCAATAGATTATTGGAAGAGGGACGTCTGTCAGAAATGGGAATTATTGTGATAGATGAACTGCATATGGTTGGTGATCCAAAAAGAGGTTATCTTCTAGAACTTATGTTGACAAAGCTTCGCTATGCAGCAGGGGAGGGCATTTCAAAATCTAGTGATGGAGAGAGTTCAGGTGGAAGCAGTGATAAGAATGATCCGGCTCAAGGTCTCCAAATGGTTGGAATGAGTGCGACAATGCCAAACGTGGCAGTAGTTGCTGATTGGCTTCAAGCAGCACTATACCAGACAGAGTTCCGACCAGTTCCTTTAGAAGAATATATTAAAGTTGGTAATTCCATTTATAACAAGAGTATGGAACTTTCTAGGACAATCCCAAAAGGAGCTGACCTTGGTGGCAAGGATCCAGACCATGTTGTTGAACTGTGTAACGAGGTTGTTCAAGAAGGACAATCAGTGTTAATATTTTGCTCTAGCCGTAAGGGTTGTGAATCAACTGCAAGACATGTTGCAAAGTTCCTTAAAAGCTTTACTGTTGATATTAATGAGAATAATTGTGAGTTTGCTGATATTGCTTCTGCTATTAACTCCTTGAGAAAGTGCCCTGCTGGGTTGGACCCCGTATTAGAAGAAACTTTTCCAGCTGGTGTTGCATTCCACCATGCTGGCCTTACGGTTGAGGAACGGGAGATTGTTGAAACTTGTTATCGGAAAGGCCTTTTACGCGTCTTAACTGCCACATCGACTTTAGCAGCCGGAGTTAATCTACCTGCTAGGAGGGTAATTTTCCGCCAACCTAGAATTGGTTGTGATTTTATTGATGGGACGAGGTACATGCAGATGGCGGGTCGTGCTGGTCGAACTGGAATCGATACAAAAGGAGAAAGTGTACTCATCTGCAAACCACAAGAGTTAAAAAAAGTTACGGGACTTCTGAATGAAAGCTGTCCACCGTTACATTCCTGTTTATCCGAAGATTTAAATGGGATGACTCATGCAATCTTAGAAGTGGTTGCTGGAGGTATAGTTCAAACTGCCAATGACATTCACCGGTATGTTAGATGTACTCTTTTGAACTCCACAAAACCATTTCTGGACGTGGTAAAATCTGCTCAAGAATCTCTAAGATGGTTGTGCCAAAGAAAATTTCTTGAATGGAATGAAGACACTAAACTCTACAGTACCACACCTCTTGGACGTGCATCTTTTGGAAGTTCTCTCTGTCCGGAAGAATCACTTATTGTGTTGGCTGATCTTTCAAGGGCAAGGGAAGGATTTGTCCTTGCATCTGACTTGCATTTGGTTTACTTGGTGACACCAATCAATGTTGATGTTGAGCCAGATTGGGAATCGTACTATGAGCGTTTTGTGAAATTGTCTCCTCTTGATCAGTCAGTTGGCAATCGAGTAGGTGTGACAGAACCGTTTTTGATGCGTATGGCACATGGTGCACCAATGGGTTCAAACAAGTCAAAATGGTCACACAATAAACGGCAAAATCAACATGGGTTCTCCAGTGGAACTGTTAGCTCGGATGATCAAACACTTCGTGTCTGTAGAAGATTCTACGTTGCTCTCATTTTATCGCTTTTAGTACAGGAAACTGCTGTGGGAGAGGTTTGTGAAGCATTTAAAGTTGCTAGAGGAATGGTTCAAGGTTTGCAAGAAAATGCTGGTCGGTTTGCATCTATGGTTGCTGTGTTCTGTGAGAGGCTGGGGTGGCATGATCTTGAAGGCTTAGTCTCTAAGTTTCAAAATCGTGTATCATTTGGAGTTAGAGCAGAAGTTGTTGAGCTTACCACCATTCCCTATGTTAAAGGCTCTCGAGCAAGAGCACTCTATAAAGCAGGTTTACGCACACCTCTTGCAATTGCCGAAGCTTCCATTCCTGAATTAGTAAAAGCACTTTTTGAATCTTCATCGTGGGCCACTGAAGGTTCTGCACAAAGGAGCTTACAATTCGGTGTTGCAAAGAAGATAAAGAATGGTGCTCGCAAGATTGTTCTGGATAAAGCTGAAGAAGCAAGGGTTGCTGCTTTCTCAGCCTTTAAGTCACTCGGATACGATGTCCCACAGTTAGCTCCACCCATATCCACTGCTTTATGCAATTCTACCAGGAAAGAAGTTGGAAGTTCCTCTGGAAGTGACACAGCTGACACAAGTCATAGCTTTGTTGATGCAAATCACATTGATAATTCTAAAATAGTTGCTTTAGAAAAAGAAAAGGACTTGATTAAATCATCTGACAATAGTGCTCGTGCTTCTGTAGAAGGAAAGTCAGACAGCATGATGCCACGTAGTTTGTCTACTGTTCCAGTTGTAGTACCTACAATAAATGAGCCCAGTATGACTTCTGGCCCTACTAAAATTCCTGATGTTACCACCCTCTCTGTTCAGTTACAGAAACAAAATGATAAGTCCATTATGCATGATGGATGCCATGCTCAAGGTACAGGGGAGCAAGATCATAGGGGGAAATTGGCTAGTGGTAACATGATTAACTCCAGCCGAAAAGGTCCCATTAATGCAGTTAGTAGTCCTGGCGGGCTTGATTCATTTTTGAATTTATGGGATACAGTAGCAGAGTTCTACTTTGACATTCATTACATCAAACGATTGGAATTGCACTCTGCTGCCCCTTTTGAAGTACATGGGATTGCCATCTGTTGGGAAAACTCTCCCATGTACTACATTAATCTTCCCAGGGATATTCTGTTGTCTGACAATAGAAAAGATGACGGGTTTTCTTTGACTGCATGCAGTTCTAAGCAGAAAGTTTCATCATCTAATTCTAAGCAAGATTTGATGAATGCCATGCATAGATGGAACAGGATTAGGAAAATACTAGAGAAAAAAGAAGTGAGAAAGTTCGCCTGGAATTTGAAGGTTCAGATTCAGGTGCTAAAAAAGCCATCAGTTTCCGTTCAGAGGTTTGGTTCCTTGGACACAATTGATAAAAATATGCAACTTGAAGTTGTAGACAATTCCTGCGTATTATTACCCCCAATCCATGTTAAAGATGCAATTGACGTGTGCATTGTGGCTTGGATTCTTTGGCCTGATGAAGAGAGTAGCTCTAGTCCAAACCTGGATAAGGAGGTAAAGAAAAGGTTATCTCCTGAGGATGCAGCAGCAGCCAATCAGTGTGGCAGGTGGAGGAATCAGATGCGAAAAGCTGCTCATAATGGTTGCTGCCGTCGGGTTGCTCAAACACGAGCATTATGTTCTGTTCTTTGGAAATTGCTTGTTTCTGAGAAACTTGTAGAAGTGCTTATGGAAATAGAAATCCCATTGGTGAATGTTCTTGCTGACATGGAGCTTTGGGGAATTAGTGTTGATTTGGAGGGATGCATCCAAGCTCGGAAATTGTTGGTGAAAAGGCTGAAGCAACTTGAAAAGGAAGCTTACAAACTGGCTGGAATGACGTTTTCATTGAGTATGCCAGCAGATATTGCAAAGGTGCTGTTTGAACACTTGAAGCTGCCCATACCTGATGGGAAAAATAAGGGAAAAAACCATCCAAGTACCGACAAACACTGTTTGGATGCACTAAGGCACGAACATCCCATTGTTCCAATCATCAAAGAGCACCGAACATTGGCAAAGCTCCTGAACTCTACACTAGGATCAATTTGTTCTCTGGCTAGGCTATCTGTATGCACACAGAAGTACACATTGCATGGTCATTGGCTCCAGACTTCCACAGCAACTGGACGACTTTCAATGGAGGAACCTAATCTTCAGTGTGTTGAGCATGCGGTGGACTTCAAGATGAATGGAGACAAAAATGGAGGCAATGCTGATGAGAGTTGTAGAATCAATGCCCGTGACTACTTTGTTCCTACACAGGATAATTGGTTACTGTTAACAGCAGATTATTCTCAGATAGAATTGAGGTTGATGGCACATTTCTCTAAAGATTCTACACTTATTGAACTTCTTCGTAAGCCTGATGGAGATGTCTTCACAATGATAGCAGCAAGATGGATTGGATGTCCTGAGGTTTCTGTGAGTTCTCAGCAGAGAGAGCAGACCAAAAAGATGGTGTACGGAATTCTTTATGGTATGGGTCCAAATAGTCTTGCCGAACAAATGGATTGCACTTCCGATGAAGCTTCTGAAAGGATTAGTAACTTCAAAAGTACTTTTCCTGGTGTTGCTTCTTGGCTTCATGAAGCTGTCACATTTTGTCGGAGTAAAGGATATGTGGAGACTCTCAAGGGAAGGAAACGATTTTTGTCAAAAATAAAATTTGGCAGCAGTACAGAAAAATCAAAAGCTCAGAGGCAAGCTGTCAATTCCATTTGTCAGGGATCTGCTGCCGACATAATTAAAATTGCAATGATTAAAATTTACTCTGAAATTTTTACTGGAGTTGATAACCTGGATTCAAGTTCTTCAGTCACAACCAAGTTCCACATGCTTAGAGATCGTTGCCGGATTCTGTTACAGGTACACGATGAATTAGTACTGGAAGTTGATCCCTCTCTGGTGAAAGAAGCTGCACTACTGTTGCAGACCAGCATGGAGAATGCAGTCTCACTTCTTGTTCCTCTTAATGTCAAATTGAAGGTTGGAAGAACATGGGGATCTTTGGAGCCATTTGCACCTGATAAATTCACGGATGACACTCCCATTGCTGAATCCTGA 6399 0.4182 MFSSSPRNRLNQFYTTKKRKVISPAPKAGRIEKGARIVVDGSPSAKGSLDSYLVPSQEEPVRPDLVRRKLGLDIGSSLDKQPVSFAEEVRHSDATRPGIENEVIVIDDDSVKENNLSDFGDGGEKSELKQFKAELFSLFCGKLPQEMRVESHKRHESVTLVEENSSIRQKCDDTSVPPFGRENISSDKNYVGMKFGVVGDTMESIPGCSAKVSGGGGDTNAFDAGFRKCSNTPTSTNMAECQTPGSLIVKACIKGTPKSTRGSSMFSPGEAFWDEAIQLADGLVVPTGNNSSMVIEESIVVRDQVEMKNSCNLQNYDGKARKILDQSKNIGLAEMHTKDSMKEATSLPVKHFDFSNDNNMDENTVQNCRVDNQVKVTCGSGIKYESTSVASHTYEQPCEVHEKILLDALDKRVRKDNFNMPSNNFNSPNNEARTTLSIHGSFEATTPSSNVSLVDHLDLHSWLPPEICSIYRKKGISKLYKWQVDCLRVNGVLQRRNLVYCASTSAGKSFVAEILMLRRVITTGKMAILVLPYVSICVEKAEHLEKLLEPLGKHVRSYYGNQGGGTLPKDTSVAVCTIEKANSLINRLLEEGRLSEMGIIVIDELHMVGDPKRGYLLELMLTKLRYAAGEGISKSSDGESSGGSSDKNDPAQGLQMVGMSATMPNVAVVADWLQAALYQTEFRPVPLEEYIKVGNSIYNKSMELSRTIPKGADLGGKDPDHVVELCNEVVQEGQSVLIFCSSRKGCESTARHVAKFLKSFTVDINENNCEFADIASAINSLRKCPAGLDPVLEETFPAGVAFHHAGLTVEEREIVETCYRKGLLRVLTATSTLAAGVNLPARRVIFRQPRIGCDFIDGTRYMQMAGRAGRTGIDTKGESVLICKPQELKKVTGLLNESCPPLHSCLSEDLNGMTHAILEVVAGGIVQTANDIHRYVRCTLLNSTKPFLDVVKSAQESLRWLCQRKFLEWNEDTKLYSTTPLGRASFGSSLCPEESLIVLADLSRAREGFVLASDLHLVYLVTPINVDVEPDWESYYERFVKLSPLDQSVGNRVGVTEPFLMRMAHGAPMGSNKSKWSHNKRQNQHGFSSGTVSSDDQTLRVCRRFYVALILSLLVQETAVGEVCEAFKVARGMVQGLQENAGRFASMVAVFCERLGWHDLEGLVSKFQNRVSFGVRAEVVELTTIPYVKGSRARALYKAGLRTPLAIAEASIPELVKALFESSSWATEGSAQRSLQFGVAKKIKNGARKIVLDKAEEARVAAFSAFKSLGYDVPQLAPPISTALCNSTRKEVGSSSGSDTADTSHSFVDANHIDNSKIVALEKEKDLIKSSDNSARASVEGKSDSMMPRSLSTVPVVVPTINEPSMTSGPTKIPDVTTLSVQLQKQNDKSIMHDGCHAQGTGEQDHRGKLASGNMINSSRKGPINAVSSPGGLDSFLNLWDTVAEFYFDIHYIKRLELHSAAPFEVHGIAICWENSPMYYINLPRDILLSDNRKDDGFSLTACSSKQKVSSSNSKQDLMNAMHRWNRIRKILEKKEVRKFAWNLKVQIQVLKKPSVSVQRFGSLDTIDKNMQLEVVDNSCVLLPPIHVKDAIDVCIVAWILWPDEESSSSPNLDKEVKKRLSPEDAAAANQCGRWRNQMRKAAHNGCCRRVAQTRALCSVLWKLLVSEKLVEVLMEIEIPLVNVLADMELWGISVDLEGCIQARKLLVKRLKQLEKEAYKLAGMTFSLSMPADIAKVLFEHLKLPIPDGKNKGKNHPSTDKHCLDALRHEHPIVPIIKEHRTLAKLLNSTLGSICSLARLSVCTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHAVDFKMNGDKNGGNADESCRINARDYFVPTQDNWLLLTADYSQIELRLMAHFSKDSTLIELLRKPDGDVFTMIAARWIGCPEVSVSSQQREQTKKMVYGILYGMGPNSLAEQMDCTSDEASERISNFKSTFPGVASWLHEAVTFCRSKGYVETLKGRKRFLSKIKFGSSTEKSKAQRQAVNSICQGSAADIIKIAMIKIYSEIFTGVDNLDSSSSVTTKFHMLRDRCRILLQVHDELVLEVDPSLVKEAALLLQTSMENAVSLLVPLNVKLKVGRTWGSLEPFAPDKFTDDTPIAES* 2133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5348 2132 Pfam Helicase conserved C-terminal domain 721 872 IPR001650 -
Mal1g5348 2132 CDD SF2_C_Ski2 683 884 - -
Mal1g5348 2132 Gene3D Taq DNA Polymerase; Chain T, domain 4 1692 1800 - -
Mal1g5348 2132 MobiDBLite consensus disorder prediction 1070 1094 - -
Mal1g5348 2132 Pfam DNA polymerase family A 1701 2113 IPR001098 GO:0003677|GO:0003887|GO:0006260
Mal1g5348 2132 Gene3D - 1879 2023 - -
Mal1g5348 2132 SMART polaultra3 1855 2080 IPR001098 GO:0003677|GO:0003887|GO:0006260
Mal1g5348 2132 Pfam Helix-turn-helix domain 877 968 IPR046931 -
Mal1g5348 2132 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 489 681 IPR014001 -
Mal1g5348 2132 MobiDBLite consensus disorder prediction 632 653 - -
Mal1g5348 2132 PANTHER DNA POLYMERASE I 479 2120 IPR002298 GO:0003887|GO:0006261
Mal1g5348 2132 MobiDBLite consensus disorder prediction 634 651 - -
Mal1g5348 2132 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 492 886 IPR027417 -
Mal1g5348 2132 Gene3D - 1818 2112 - -
Mal1g5348 2132 CDD DNA_pol_A_theta 1692 2115 - -
Mal1g5348 2132 Coils Coil 1697 1717 - -
Mal1g5348 2132 Gene3D - 1425 1689 IPR036397 GO:0003676
Mal1g5348 2132 Pfam DEAD/DEAH box helicase 492 664 IPR011545 GO:0003676|GO:0005524
Mal1g5348 2132 SUPERFAMILY DNA/RNA polymerases 1670 2115 IPR043502 -
Mal1g5348 2132 CDD DEXHc_POLQ-like 463 684 - -
Mal1g5348 2132 Gene3D - 462 684 IPR027417 -
Mal1g5348 2132 Gene3D - 694 892 IPR027417 -
Mal1g5348 2132 SMART ultradead3 475 690 IPR014001 -
Mal1g5348 2132 MobiDBLite consensus disorder prediction 1072 1094 - -
Mal1g5348 2132 PRINTS DNA-polymerase family A (pol I) signature 1984 1995 IPR002298 GO:0003887|GO:0006261
Mal1g5348 2132 PRINTS DNA-polymerase family A (pol I) signature 1925 1950 IPR002298 GO:0003887|GO:0006261
Mal1g5348 2132 PRINTS DNA-polymerase family A (pol I) signature 1809 1831 IPR002298 GO:0003887|GO:0006261
Mal1g5348 2132 PRINTS DNA-polymerase family A (pol I) signature 1962 1973 IPR002298 GO:0003887|GO:0006261
Mal1g5348 2132 PRINTS DNA-polymerase family A (pol I) signature 2063 2076 IPR002298 GO:0003887|GO:0006261
Mal1g5348 2132 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 721 921 IPR001650 -
Mal1g5348 2132 SUPERFAMILY Sec63 N-terminal domain-like 1095 1219 - -
Mal1g5348 2132 SUPERFAMILY Ribonuclease H-like 1425 1689 IPR012337 -
Mal1g5348 2132 Gene3D - 1063 1198 - -
Mal1g5348 2132 PANTHER DNA POLYMERASE THETA 479 2120 - -
Mal1g5348 2132 SMART helicmild6 790 872 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5348 Mal-Chr1 127145570 127160717 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5348 K02349 - gmx:100813857 3183.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5348 1 127145570 127160717 Mal1g5348 1 127145570 127160717 ECH